|
Name : capL (Q91_0701) Accession : YP_006837242.1 Strain : Cycloclasticus sp. P1; MCCC 1A01040 Genome accession: NC_018697 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase subfamily Function : - COG functional category : - COG ID : - EC number : - Position : 732734 - 733999 bp Length : 1266 bp Strand : + Note : - DNA sequence : ATGACATTTAATGTCGCCGTGATAGGCCTTGGTTATGTTGGTTTGCCATTAGCCGTTGAGTTGGGTAAACAGTTTCCAAC GGTTGGCTTTGATATTGATAATGAGCGTATTTCTGCATTACATAAAGGCTCTGATGTTACCTTGGAAATATCAGCTGAAG AGATCAGTGCTGCGAAGCAATTGAGATTTACAGCAAAGGCAGATGAAATATCGGCTGCGAATATCTACATTATTACGGTT CCCACGCCGATAGATAATGGTAATAACCCAAATTTAACACCGATTAAAGAAGCGACAACAGTGGTGGCTAACTACCTGGG CAAAGGGGATGTTGTTATCTATGAGTCTACAGTGTACCCGGGGGCAACAGAAGAGGTTTGTGTGCCAATTCTTAGGCAGA TATCAGGGCTGGCATATAACGAAGAGTTCTTTTGTGGTTATAGTCCCGAACGCATTAACCCGGGGGATAAAACACGTAGT TTAACGTCTATTGTTAAAGTAACATCTGGCTCAACGCCGGATGCCGCAGCGCTAGTGGATCAGCTTTACCAGTCAATTAT TTCAGCCGGCACTTACAAGGTTAGTAGCATCAAAGTGGCTGAAGCATCCAAAGTTATTGAGAATACACAACGCGATATTA ATATAGCCCTTATGAACGAATTGGCGCATATTTTTAGCCGTATTGGTATAGATACAGAAGAAGTACTTGAGGCTGCAGGG ACAAAGTGGAACTTCTTACCCTTTAGGCCAGGTTTAGTTGGCGGGCACTGTATTGGAGTTGATCCATATTATTTGGCGCA TAAAGCAGAAACACTTGGGTATCACCCGCAATTGATTGCTGCTGGGCGACGGATTAATGACAAAATGGGGTCGTTTGTAG TCAGTGAAGTGCTGAAACTTATGGCCAAAAAGCGTTTGAGTATTGTTGGTGCTAACGTGTTAATAATGGGTTTATCGTTT AAAGAAAATTGCCCAGACCTACGAAATACCCGTGTAATAGGCATGGTTGAGGAGCTTGAATCATACAATGCTAACGTCGA GGTGTACGACCCTTGGGTAAACGTTGATGACTTAAAAAATGAACAACAACTTAAGGTGATAAAGCAGCCGACTAAAGGAT CGTACGATGCCATTATTATTGCTGTGTCGCACGATCAATTTAAAGCCCTGGGTGTGAATGCTGTTAGAGCCTTTGGGAAG CCTAATCACGTGTTGTATGACATCAAGTATTTGTTTGCTTCAAATGAGACAGATGGGCGGTTGTAA Protein sequence : MTFNVAVIGLGYVGLPLAVELGKQFPTVGFDIDNERISALHKGSDVTLEISAEEISAAKQLRFTAKADEISAANIYIITV PTPIDNGNNPNLTPIKEATTVVANYLGKGDVVIYESTVYPGATEEVCVPILRQISGLAYNEEFFCGYSPERINPGDKTRS LTSIVKVTSGSTPDAAALVDQLYQSIISAGTYKVSSIKVAEASKVIENTQRDINIALMNELAHIFSRIGIDTEEVLEAAG TKWNFLPFRPGLVGGHCIGVDPYYLAHKAETLGYHPQLIAAGRRINDKMGSFVVSEVLKLMAKKRLSIVGANVLIMGLSF KENCPDLRNTRVIGMVEELESYNANVEVYDPWVNVDDLKNEQQLKVIKQPTKGSYDAIIIAVSHDQFKALGVNAVRAFGK PNHVLYDIKYLFASNETDGRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 7e-128 | 58 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 7e-128 | 58 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 3e-96 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| capL | YP_006837242.1 | nucleotide sugar dehydrogenase subfamily | VFG0431 | Protein | 3e-128 | 58 |
