Gene Information

Name : Q91_0294 (Q91_0294)
Accession : YP_006836837.1
Strain : Cycloclasticus sp. P1; MCCC 1A01040
Genome accession: NC_018697
Putative virulence/resistance : Virulence
Product : Sigma 54-dependent transcriptional activator containing CheY-like receiver domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 304481 - 305851 bp
Length : 1371 bp
Strand : -
Note : -

DNA sequence : 
ATGCCGCAAACACTCGCCCTTATTGTCGACGATGAACCGGACATTTTAGAGTTGCTGGAAATTACCCTGTCACGCATGGG
CATCGCCAGCAAACCAGCACACGACCTTAGCGAAGCTAAGCTGCTGTTAAAGACCCACTCTTTTGATATTTGCCTAACCG
ACCTGCAATTACCAGACGGTAACGGCTTAGAGCTGGTTAAGCACGTACAAACACACTACCCCAGCACACCCACCGCTGTT
ATTACCGCTTTTGGCAGTATGGAAGTTGCTATCAAAGCCCTCAAGCTAGGTGCCTTTGATTTTGTTTCCAAACCGGTTGA
CTTAAAAAGCTTAAAAAACCTTGTTAGCTCCGCCATAAAAATTAACGATACTGTTGAACCTGTTGATCGACGAAGTCGCG
ACCAATTATTGGGAGACTCTGTGATGATGGCTAACGTACGCGCCAAAATTGCAAAGCTTGCTCGCAGCCAAGCACCCATC
TATATCAGTGGTGAATCAGGCACCGGTAAAGAATTAGTTGCCAAGCTAATTCATGAAAAAGGCCCTCGGGCTAATCAAGC
TTTTGTCCCCATTAACTGCGGCGCCATCCCCCATGAACTGATGGAAAGTGAGTTTTTTGGCCATAAAAAAGGCAGTTTTA
CCGGCGCTATCGCTGATAAAAAGGGGCTATTCCAACTTGCTCATGGTGGCACTTTATTTTTAGATGAGATCGCCGACCTC
CCTCTACACATGCAAGTTAAATTATTACGGGCCATACAAGAAAAGTCCATCCGTCCCATCGGCAGTGATACTGAAACCGT
GATCGACACCAGAATTTTGTGTGCCACCCATAAAAACTTAAGCGAACTCGTTGAAAAAGGGAGCTTTCGACAGGATTTAT
ATTACCGGATTAATGTCATCGAACTCCCTTTGCCAGCTCTGCGCGAACGCAAGGAAGACATCCAGCAGCTCGCCACCCAT
ATTTTACAAAAATTAAATACCGAACATGGAAATACTACTATAAGCCTTAGTGAAAATGCGCTAAAAGCCCTAACAAAGTA
CCCCTTCCCTGGCAATGTACGCGAACTAGAAAACATACTCGAACGTGCATTTACCCTATGTGAAAATGGGCTTATTCACC
AGGCAGATTTACAGCTGCCCGAAACCCCGCATAACATACCTAACTCAATCACTACCCCAGCGTCATCGCCCAATGCAAGT
GGCGAATCATCAGACGCACCACTGGAAGATTACCTTGGCACACTGGAAAAAGAAGCCATCGTCAATGCATTAGAAAAAAC
ACGCTGGAACAAAACAGCCGCAGCAAAAGACCTAGGTATTACCTTTCGTGCCTTACGATACCGACTAAAAAAACTAGGTT
TAGACACTTAA

Protein sequence : 
MPQTLALIVDDEPDILELLEITLSRMGIASKPAHDLSEAKLLLKTHSFDICLTDLQLPDGNGLELVKHVQTHYPSTPTAV
ITAFGSMEVAIKALKLGAFDFVSKPVDLKSLKNLVSSAIKINDTVEPVDRRSRDQLLGDSVMMANVRAKIAKLARSQAPI
YISGESGTGKELVAKLIHEKGPRANQAFVPINCGAIPHELMESEFFGHKKGSFTGAIADKKGLFQLAHGGTLFLDEIADL
PLHMQVKLLRAIQEKSIRPIGSDTETVIDTRILCATHKNLSELVEKGSFRQDLYYRINVIELPLPALRERKEDIQQLATH
ILQKLNTEHGNTTISLSENALKALTKYPFPGNVRELENILERAFTLCENGLIHQADLQLPETPHNIPNSITTPASSPNAS
GESSDAPLEDYLGTLEKEAIVNALEKTRWNKTAAAKDLGITFRALRYRLKKLGLDT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 6e-112 52
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 6e-112 52

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q91_0294 YP_006836837.1 Sigma 54-dependent transcriptional activator containing CheY-like receiver domain BAC0467 Protein 6e-69 41
Q91_0294 YP_006836837.1 Sigma 54-dependent transcriptional activator containing CheY-like receiver domain BAC0089 Protein 1e-70 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q91_0294 YP_006836837.1 Sigma 54-dependent transcriptional activator containing CheY-like receiver domain VFG1214 Protein 2e-137 59