Gene Information

Name : Q91_1970 (Q91_1970)
Accession : YP_006838507.1
Strain : Cycloclasticus sp. P1; MCCC 1A01040
Genome accession: NC_018697
Putative virulence/resistance : Virulence
Product : nucleotide sugar epimerase/dehydratase WbpM
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2061542 - 2063443 bp
Length : 1902 bp
Strand : -
Note : -

DNA sequence :
ATGGATATTTTTTCACTTCCAGGTTGGTTCATTAGTCGAAGCAGGCGGATAAAGCGTGCGGTTACGCTGCTATTTGATTT
TATTGTTATTACGTTGGCTTTATGGGTATCCTTCTCACTACGGCTAGGTGAGTTTTATTGGCCCGAAGGCAGCGTAATTT
GGTTGTTTGCTGTTGCGCCTTTTATAGCAACACCTATTTTTATTAGATTGGGCTTGTATCGAGCGATTATTAGATATATT
GGCTTTCACTCGTTATGGGTTGTGGTTAAGGCGGTCTCTCTTTATAGCTTGCTTATTGCTTTTTTTGTTGTGTTGGCGAA
CATTGAAGTTGTGCCGCGTTCAGTTCACATTATTAATTGGTTGGTGGCTCTCCTTATGGTGGGTGGAAGTCGAATGGTGG
TGCGTTGGTGGCTGGCAGGGTTGGCTCCTGCGAATGTAAATGCAGCTCGTAATGTGGTCATTTATGGTGCGGGCTCGTCA
GGTATGCAAGTGCTTGGGCAACTAAATGTAAAAAGTGGTATGAAAGTAGTGGCCTTTATTGATGACGAGCCATCACTTCA
TCGGCGGCAAATGGGTGATGTTCGTGTGCACCCGTTCTCACATTTGAGCCGACTTATTGAGCGACATGGAGTGAAGGATG
TGTTATTGGCGATGCCCTCAGTGTCACGGTCTCGCCGTAACCAAGTTATTGCTTTGTTGGAGCCTTACCCAGTAACTGTG
AAAACGTTACCAACATTAGCTGAAATTGCCGAGGGTGAAGTAACGGTTGATGATATAAGAGACGTTGAAATTGAAGATTT
ATTAGGCCGTGATCAGGTATTGCCTAATAAATCTTTGATGGCGAAAAACATACATAATAAAGTTGTGATGGTAACGGGGG
CAGGTGGCTCAATCGGAGCTGAGCTGTGTCGTCAAATCTTGCAGCAAAAGCCAAAAGAGATTGTTTTATTTGAACATAGT
GAGTTTGCACTTTATATGATAGAGCATGATTTAAAAAATCAGCCGATCAGCGAAGAAGTGGTCATTAAGCCTGTCTTGGG
GTCGGTAACGGATTCAGATCGAGTTTTATTAGCTTGTCAGGCGGCGCACGTTGAAACGGTATATCATGCTGCAGCCTATA
AGCATGTGCCATTAGTTGAGCAAAACCCAAGAGAAGCAATTAAAAACAATATTCTGGGGACCTTATATACAGCTGAGGCA
GCATTAAAGTCGAAGGTTAAGGACTTTATACTGATCTCAACAGATAAGGCTGTGCGGCCTACTAATACGATGGGGGCTTC
AAAAAGAATGGCTGAATTGGTTTTGCAGGCATTAAGTAATAAGCATAGAGGCGTATCTGCAACACAATTTGCGATGGTGC
GTTTTGGCAATGTGCTCGGCTCGTCAGGCTCCGTCATTCCTCTGTTTAAGAAGCAAATAAAAGAAGGTGGTCCAGTGACT
GTGACGGACCCTAAAATTATTCGTTACTTTATGACAATCCCTGAGGCAGCCCAATTGGTTATACAAGCGGGTGCCATGGC
AAAAGGTGGCGATGTGTTCGTTTTAGACATGGGCGATCCTGTTAAAATATTAGAATTGGCAAAGCGAATGATTCATTTAA
GTGGACTAGAAGTTAAAGGAGATGATACGCCGCACGGAGACATCGAAATAAAGTTCACCGGGTTACGCCCGGGTGAAAAG
CTGTATGAAGAGTTATTGATCGGTAATGATGTGAAAAATACAGACCATGAAAAAATCATGCGGGCTAATGAAAGTATGAT
TCCTTGGGAAGAGCTGAATGTTCTCATTAGGCGTTTGCAGCAAGCGATTAATGACAATGATGATGTTGAAATTAGAGCGG
TATTATCAGAAGCAGTGGTTGGTTATAAACCACAATGTGCTATTGCGAATGTGCTGCATTAG

Protein sequence :
MDIFSLPGWFISRSRRIKRAVTLLFDFIVITLALWVSFSLRLGEFYWPEGSVIWLFAVAPFIATPIFIRLGLYRAIIRYI
GFHSLWVVVKAVSLYSLLIAFFVVLANIEVVPRSVHIINWLVALLMVGGSRMVVRWWLAGLAPANVNAARNVVIYGAGSS
GMQVLGQLNVKSGMKVVAFIDDEPSLHRRQMGDVRVHPFSHLSRLIERHGVKDVLLAMPSVSRSRRNQVIALLEPYPVTV
KTLPTLAEIAEGEVTVDDIRDVEIEDLLGRDQVLPNKSLMAKNIHNKVVMVTGAGGSIGAELCRQILQQKPKEIVLFEHS
EFALYMIEHDLKNQPISEEVVIKPVLGSVTDSDRVLLACQAAHVETVYHAAAYKHVPLVEQNPREAIKNNILGTLYTAEA
ALKSKVKDFILISTDKAVRPTNTMGASKRMAELVLQALSNKHRGVSATQFAMVRFGNVLGSSGSVIPLFKKQIKEGGPVT
VTDPKIIRYFMTIPEAAQLVIQAGAMAKGGDVFVLDMGDPVKILELAKRMIHLSGLEVKGDDTPHGDIEIKFTGLRPGEK
LYEELLIGNDVKNTDHEKIMRANESMIPWEELNVLIRRLQQAINDNDDVEIRAVLSEAVVGYKPQCAIANVLH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1D AAA64643.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 7e-84 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q91_1970 YP_006838507.1 nucleotide sugar epimerase/dehydratase WbpM VFG0029 Protein 6e-121 45
Q91_1970 YP_006838507.1 nucleotide sugar epimerase/dehydratase WbpM VFG1300 Protein 5e-83 41