Gene Information

Name : ribD (Q91_1587)
Accession : YP_006838125.1
Strain : Cycloclasticus sp. P1; MCCC 1A01040
Genome accession: NC_018697
Putative virulence/resistance : Unknown
Product : 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1677369 - 1678481 bp
Length : 1113 bp
Strand : -
Note : -

DNA sequence : 
ATGACGTTTACGTCTGATGATCAACGCCATATGAACCGAGCGCTAGAACTGGCGGCGCTTGGTAGGTACAGCACAAAACC
AAACCCTTGTGTCGGCTGTGTTATTGTTGACGAGGGGCACGTTATTGCTGAAGGTTGGCATAAAAAAGCTGGCGAACCAC
ATGCTGAAGTATATGCGTTACAGAGTGCTGCTGCAGCAGCGAAAGGTGCAACTGCGTATGTGACATTAGAGCCTTGCAGC
CACCATGGCAGAACACCACCGTGTGCTGATGGTTTAATTAACGCGGGGGTATCTCGCGTGGTTATTGCTATGCAAGACCC
TAATCCTATTGTGTCCGGGCAAGGTGTTGCTAAACTTCAGGCTGCAGGTATTGAGGTGGCTGTTGGCTTGTTTGAAGAGC
AAGCAATAGCGCTAAATCAAGCGTTCTATCATAGGATGACTACAGGCCAGCCGTATATTTTTAGTAAAGTGGCAATGAGT
CTGGACGGTAAAACAGCGATGGCATCGGGCGAAAGCCAATGGATAACAGGAGCAGCGGCGAGAAAGGATGTACATCAGCT
ACGTGCTGAAAGTGATATTGTCTTAACAGGGGTAGGAACAATCCTTGCTGATGACCCCCAGTTAACAGCGAGAGATGGTT
TGGAGCATATAGCGGTAGAGCAACCGCATCGAGTTATTCTAGATTCGCAGTTAAAAACCCCAGTGAATGCTCGTATTTTT
AAGTCGAACGTTAAGGTCACTATTTTAACCTGTAGTAATAATCAAGACGCTATGACGGCTTTGCAGCAAGCTGGCTGTAC
TGTGCAGGTGATTGCTGCCGATGCTCAGGGACAAGTTGATTTATACGCCGTTCATGAGTGGCTAAGGTCGCAGGATATTA
ATAGTGTAATGGTTGAAGCCGGTGCATTGTTAAATGGTGCACTGTTGCAAGCAGGTATTATTGATGAGTTAATCATTTAT
ATGGCGCCAAGTGCCTTAGGGTCGGATGCAAGAGGTGCTTTTTCTATGCCTCAAGTATCAACGTTGTCAGATAGAGTTCA
ACTACACTATGTGGGTATGCATGAGCTTGATAGCGATATTAAATTAACTTATCGGGTTAAAAGGGAAGGCTAA

Protein sequence : 
MTFTSDDQRHMNRALELAALGRYSTKPNPCVGCVIVDEGHVIAEGWHKKAGEPHAEVYALQSAAAAAKGATAYVTLEPCS
HHGRTPPCADGLINAGVSRVVIAMQDPNPIVSGQGVAKLQAAGIEVAVGLFEEQAIALNQAFYHRMTTGQPYIFSKVAMS
LDGKTAMASGESQWITGAAARKDVHQLRAESDIVLTGVGTILADDPQLTARDGLEHIAVEQPHRVILDSQLKTPVNARIF
KSNVKVTILTCSNNQDAMTALQQAGCTVQVIAADAQGQVDLYAVHEWLRSQDINSVMVEAGALLNGALLQAGIIDELIIY
MAPSALGSDARGAFSMPQVSTLSDRVQLHYVGMHELDSDIKLTYRVKREG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 4e-54 48
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 4e-54 48