Gene Information

Name : fliP (Q91_1539)
Accession : YP_006838078.1
Strain : Cycloclasticus sp. P1; MCCC 1A01040
Genome accession: NC_018697
Putative virulence/resistance : Virulence
Product : flagellar transport protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1626631 - 1627362 bp
Length : 732 bp
Strand : -
Note : -

DNA sequence :
ATGAAAAGGCCACTATTGTTTATTATTTTTTTCTCTCTTGTTCCCATGACGAGTTTTGCGGCGAATGGCATTGAGGCCAT
TACTATCGCTGGAGACGGTAAAAGTTATTCGGTCACGCTGCAAATATTAGCAGTTATGACATTGCTGACAGTTTTACCAA
GCTTGTTAGTAATGATGACCTCGTTTACACGAATCATTATTGTTTTTTCCATTCTTCGACAAGCGATGGGCACACCACAA
ACACCTAGCAATCAAATTTTGTTGGGGCTGGCTTTATTTTTAACTTTTTTCATTATGTCGCCAGTGTTAGAAAAGGCGAA
TGAAGAGGCTCTGCAACCTTATTTAAACGATCAGATAGCGGCAGATATTGCTATTACAAAAGCAATAGAGCCGTTTCGTG
GCTTTATGTTGCTCCAGACCAGAAGTGATGATTTGGAAATGTTTGCCAGAATTTCTGGAGCGGAGCCTATCACAGATGAG
TCAGATGTGCCGTTATCGCTGTTATTACCGGCGTTTGTGACCAGTGAGCTGAAAACAGCGTTTCAAATTGGGTTTATGAT
CTTTGTTCCTTTTCTTATCATCGATATGGTCGTGGCCAGTGTCTTGATGTCGATGGGTATGATGATGTTATCTCCATTGA
TTATTTCCTTGCCATTTAAGCTGATGTTATTTGTTTTAGTAGATGGCTGGTCGCTGATTATGGAGACTTTAGCCGCGAGC
TTCTTTACTTAG

Protein sequence :
MKRPLLFIIFFSLVPMTSFAANGIEAITIAGDGKSYSVTLQILAVMTLLTVLPSLLVMMTSFTRIIIVFSILRQAMGTPQ
TPSNQILLGLALFLTFFIMSPVLEKANEEALQPYLNDQIAADIAITKAIEPFRGFMLLQTRSDDLEMFARISGAEPITDE
SDVPLSLLLPAFVTSELKTAFQIGFMIFVPFLIIDMVVASVLMSMGMMMLSPLIISLPFKLMLFVLVDGWSLIMETLAAS
FFT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 3e-25 42
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 5e-22 41
escR AAC31528.1 L0049 Virulence LEE Protein 2e-24 41
escR ACU09473.1 type III secretion system protein EscR Virulence LEE Protein 2e-24 41
escR YP_003236103.1 T3SS structure protein EscR Virulence LEE Protein 2e-24 41
escR NP_290283.1 type III secretion system protein Virulence LEE Protein 2e-24 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_006838078.1 flagellar transport protein FliP VFG1259 Protein 3e-59 65
fliP YP_006838078.1 flagellar transport protein FliP VFG2016 Protein 2e-55 64
fliP YP_006838078.1 flagellar transport protein FliP VFG2494 Protein 3e-55 61
fliP YP_006838078.1 flagellar transport protein FliP VFG2338 Protein 7e-54 58
fliP YP_006838078.1 flagellar transport protein FliP VFG0394 Protein 6e-23 41
fliP YP_006838078.1 flagellar transport protein FliP VFG0827 Protein 1e-24 41