Gene Information

Name : BUPH_08533 (BUPH_08533)
Accession : YP_006836043.1
Strain :
Genome accession: NC_018696
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 230732 - 231799 bp
Length : 1068 bp
Strand : -
Note : identified by sequence similarity; putative

DNA sequence :
GTGATCAGCTACGAGGAGTACATGGAAATCGAGATTCTGCGTCGCCAGGGAAACAGCCTCCGGGACATCGCGGTCGAGAC
CGGCATGGCAGTCAACACGGTCCGGAAGTATCTGGCATCGGGACCGCCGCAACGCAAGGCCCGTCAACCCGTGGCCGGCA
AACTCGCGCCGTTCAAGACATATCTACAGGCACGCGTCGAAGCAGCGAAGCCAGACTGGATTCCGGCGACGGTGCTCAAG
CGCGAGATTGAGGAGCGAGGTTACACGGGAGGATTACGCCGCGTGCAGGACTATCTGCAGAAGCTTCGACCCGCTGCACG
CCCCGATCCAGTGGTCCGGTTCGAGACAGAGCCGGGCCATCAGATGCAGATGGACTGGATCGAGTTTCGCAAGCCGGGGC
ACAAGCTTGGCATGCTCGCGGCGTTCGTTGTCGACTTGGGCTACAGCCGCGTCAGCTACGCGGAGTTTGTCACCGACATG
CGTATCGAAACGCTGCTGGCGTGTCACGTACGGGCATTCGACGCATTTGGCGGCGTCACCAGAGAGATCGTGTACGACAA
CATGAAGACAGTGATCCTGAAGCGTGATGCGTACGGCAAGAAACAGCACCGATATCATCCGGGGTTCGCTGACTTCGCCA
AACACCATGGGTTCGTGCCTCGCGTCTGCAAGCCATACCGCGCGAAGACGAAGGGCAAGGTCGAGCGTATGAACGGATAT
TTGCGCTACAGCTTCTGGGTCCCCTTGGTTTCGATGCTCAAACAGGCAGGGCTGACAGCGGACTGCGGCCTCTGCAACGA
GCGCATCAGGCTGTGGCTGCGCGACGTCGCCAACGTCCGTGTGCACGGTACGACCAAACGTGTACCTGCCGAAGTGTTGC
TCGAAGAGCGGCCACATCTTCTGCCACTGCCGGCACCATACGTGGGGCGTTCGGTTAGAACCGGAGCGACACCGCATCAG
CAACCGAAACCGGCGTCGCGGTACGCGACATCGGAGTGGAATAAGCCGTTGCAGCACCCGTTGTCGGTCTACGATGCATT
CAGCCGCACCCAGGAGGTGAATGCATGA

Protein sequence :
MISYEEYMEIEILRRQGNSLRDIAVETGMAVNTVRKYLASGPPQRKARQPVAGKLAPFKTYLQARVEAAKPDWIPATVLK
REIEERGYTGGLRRVQDYLQKLRPAARPDPVVRFETEPGHQMQMDWIEFRKPGHKLGMLAAFVVDLGYSRVSYAEFVTDM
RIETLLACHVRAFDAFGGVTREIVYDNMKTVILKRDAYGKKQHRYHPGFADFAKHHGFVPRVCKPYRAKTKGKVERMNGY
LRYSFWVPLVSMLKQAGLTADCGLCNERIRLWLRDVANVRVHGTTKRVPAEVLLEERPHLLPLPAPYVGRSVRTGATPHQ
QPKPASRYATSEWNKPLQHPLSVYDAFSRTQEVNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
s0035 CAD33773.1 ORF A protein Not tested PAI I 536 Protein 1e-59 45
y1094 CAD42088.1 OrfA protein of IS100 transposase Not tested PAI II 536 Protein 1e-59 45
y1093 YP_002346890.1 transposase for insertion sequence IS100 Not tested HPI Protein 3e-59 45
orfA CAE85182.1 OrfA protein, transposase, IS100 Not tested PAI V 536 Protein 1e-59 45
y2411 NP_669718.1 transposase Not tested HPI Protein 3e-59 45
y1094 CAC43410.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 1e-59 45
YPTB1585 YP_070113.1 transposase Not tested HPI Protein 3e-59 45
unnamed CAA21403.1 - Not tested HPI Protein 3e-59 45
unnamed CAB46599.1 IS100 transposase Not tested HPI Protein 3e-59 45
api83 CAF28557.1 transposase Not tested YAPI Protein 3e-59 45
y1093 CAD33720.1 ORF A protein Not tested PAI I 536 Protein 2e-59 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BUPH_08533 YP_006836043.1 integrase catalytic subunit VFG1626 Protein 7e-60 45
BUPH_08533 YP_006836043.1 integrase catalytic subunit VFG1607 Protein 7e-60 45
BUPH_08533 YP_006836043.1 integrase catalytic subunit VFG1461 Protein 1e-59 45
BUPH_08533 YP_006836043.1 integrase catalytic subunit VFG1514 Protein 7e-60 45