Gene Information

Name : BUPH_05536 (BUPH_05536)
Accession : YP_006832991.1
Strain :
Genome accession: NC_018695
Putative virulence/resistance : Virulence
Product : polysaccharide biosynthesis protein CapD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 761258 - 763150 bp
Length : 1893 bp
Strand : +
Note : identified by sequence similarity; putative

DNA sequence :
ATGCCGCTGATGTTAAGAAACAAGGCCACCTGGCTGTCTTTCAGCGCCTTCCTTTTCGATTTGTGCGCGGTTGCCGGATC
GTGGCTCATCGCGTATCTCCTCCGTTTCAACGGCTCGATCCCGGACGACTTCCGCGTCGGCGCCGTGCGTTCCCTGCTGT
GGGTACTGCCGGTCTACGGTGTGATGTTCCGCATTTTCGGCCTGTACCGCGGCATGTGGGTATTCGCCAGCTTGCCCGAT
CTGCTTCGAATCTCGAAAGCTGTCATCGCCGGAGCGCTCGTTGCGATGGTTGTCTCCGTATTGGTACAACCTTCGCCCAT
CGTGCCGCGCTCGGTCCTCGTCGTGTCGCCGCTCTTCCTGTTCCTGGCCATGGGCGGATCGCGGGCGCTGTACCGGGCGA
CCAAGGAGTTCTACCTCTACGGCGGCCTCGTCGCGCAGGGCAAGCCGGTCGTCGTGCTCGGCGCGGGCAATGCCGGTGCG
AGCCTCGCGCGTGAGTTGTCGCGGTCGAGTGAATGGCGGCTGGTCGGCCTGCTCGACGACGACGTGGCCAAGCACGGGCG
CGAAATCTACGGTTACAAGGTTCTCGGTTCGATCAGCGAATTGCCGCGCATGGCCGAGGAGCTGAAAACCGAATACGCGA
TCATCGCCATCCCGTCGGCGTCTGTCGATGTTCAGCGTCGCGTTGCCACGCTCTGTGTGCGCGCCGGCGTGCGCGCGCTC
GTGCTGCCGGCGTTGACCGCTGTCAGCCAGGGCCAGGCCTTCCTCTCCCGCGTCCGCCAGATCGACCTCGAAGATCTATT
GGGCCGCGACCCGGTCATGATCGACACCGACCACGTCGAAGCGCTCCTCAAAAACCGCGTCGTCATGGTCACGGGCGCGG
GTGGCTCGATCGGCTCGGAGCTGTGCCGGCAGATTCTGCGCTTCGGCCCGGTTCAACTGGTGGCGTTCGACATCTCCGAG
TTTTCCATCTACCGGCTCAATGAAGAGCTGTCCGACAAGTATCCGGAAGTCTCCGTGGTGCCGATCATCGGCGACGTGAA
GGACTCGCTGCTGCTCGATCAGGTCATGGCGCGCTATACGCCGCACATTGTTTTTCACGCCGCGGCCTACAAGCACGTGC
CGCTCATGGAAGAAGTGAACGCGTGGCAGGCCGTGCGCAACAACGTGCTCGGCACCTATCGCGTGGCGCGCGCGGCGATC
CGTCACGACGTCGCGCACTTCGTGCTGATTTCCACCGACAAGGCCGTCAACCCCACCAATGTGATGGGCGCGAGCAAGCG
TCTCGCGGAAATGGTGTGCTCGTCGCTTCAGCAGCAGGGCACGCGGCGCACGCAGTTCGAGACCGTGCGCTTCGGCAATG
TGCTCGGCAGCGCAGGCAGCGTGATCCCGAAATTCCAGGAGCAGATCGCGCGCGGCGGTCCGGTGACGGTCACGCATCCG
GAAATCACGCGTTTCTTCATGACGATTCCAGAAGCGTCGCAGCTCGTGCTGCAAGCGTCGAGCATGGGGCATGGCGGCGA
AATCTTCATTCTCGACATGGGTAAGCCGGTGCGCATCGCCGACCTGGCACACGATCTGATCCGGCTATACGGCTTTACGG
AAGAGCAGATCCGCGTCGTCTACACGGGCCTGCGCCCCGGCGAAAAGCTCTACGAAGAACTGCTCGCCGACGACGAAACC
ACCACGCGCACGCCGCATCCCAAGCTGCGTATCGCGAAGGCGCGCGAAGTGCCGGACAGCCTGATCGACAACCTGCTGCC
GTGGCTGATGCAGCACCGCGTTCCAACCGATGACGAAGTTCGCCGCGATCTGCGCCGCTGGGTCGCCGAATATCAGCCGG
CCACCTCGACTGCACTGCGCAGCGTACCTGCGGTGGCTAGCCGAGCCTCGTGA

Protein sequence :
MPLMLRNKATWLSFSAFLFDLCAVAGSWLIAYLLRFNGSIPDDFRVGAVRSLLWVLPVYGVMFRIFGLYRGMWVFASLPD
LLRISKAVIAGALVAMVVSVLVQPSPIVPRSVLVVSPLFLFLAMGGSRALYRATKEFYLYGGLVAQGKPVVVLGAGNAGA
SLARELSRSSEWRLVGLLDDDVAKHGREIYGYKVLGSISELPRMAEELKTEYAIIAIPSASVDVQRRVATLCVRAGVRAL
VLPALTAVSQGQAFLSRVRQIDLEDLLGRDPVMIDTDHVEALLKNRVVMVTGAGGSIGSELCRQILRFGPVQLVAFDISE
FSIYRLNEELSDKYPEVSVVPIIGDVKDSLLLDQVMARYTPHIVFHAAAYKHVPLMEEVNAWQAVRNNVLGTYRVARAAI
RHDVAHFVLISTDKAVNPTNVMGASKRLAEMVCSSLQQQGTRRTQFETVRFGNVLGSAGSVIPKFQEQIARGGPVTVTHP
EITRFFMTIPEASQLVLQASSMGHGGEIFILDMGKPVRIADLAHDLIRLYGFTEEQIRVVYTGLRPGEKLYEELLADDET
TTRTPHPKLRIAKAREVPDSLIDNLLPWLMQHRVPTDDEVRRDLRRWVAEYQPATSTALRSVPAVASRAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1D AAA64643.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-89 45
SSP0063 YP_300153.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 7e-91 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BUPH_05536 YP_006832991.1 polysaccharide biosynthesis protein CapD VFG1300 Protein 8e-91 49
BUPH_05536 YP_006832991.1 polysaccharide biosynthesis protein CapD VFG0029 Protein 2e-79 45