Gene Information

Name : BUPH_03877 (BUPH_03877)
Accession : YP_006835789.1
Strain :
Genome accession: NC_018695
Putative virulence/resistance : Virulence
Product : lytic transglucosyllase catalytic subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4107811 - 4108257 bp
Length : 447 bp
Strand : -
Note : identified by sequence similarity; putative

DNA sequence :
ATGAAACGAACCTTCGTGACCTTTCTGGCAGGAATTACCGTGTTGGCCGCAGCCGGGCCGGCACACGCCGATTGCTTCGA
CGAAGCCGCGAAATATCAGAAAGTGAACCCGCTGATTCTGCGCGCGATCGCGTGGCAGGAATCGCATAACCGTCCCGACG
CCCAGCACAAGAACGCCAACGGTTCGACCGATTACGGCGTCATGCAGATCAACTCCGTTCACCTGCCCACGCTGGCTCAG
TATGGCATCTCGCAAGGCACGCTCATGGAGCCGTGCAAGAACGTCTACATCGCCGCATGGCATCTGCGCCGGCAGATGAA
CAAGTACGGCAATACCTGGCAGGCGGTAGGCGCGTATCACTCGGAGACGCCCGCGTTGCGCGACAAGTACGCTCAACAGA
TTGCCGCGATTCTGCGCAAATGGAATCTGATGCCGGCGGCACGCTGA

Protein sequence :
MKRTFVTFLAGITVLAAAGPAHADCFDEAAKYQKVNPLILRAIAWQESHNRPDAQHKNANGSTDYGVMQINSVHLPTLAQ
YGISQGTLMEPCKNVYIAAWHLRRQMNKYGNTWQAVGAYHSETPALRDKYAQQIAAILRKWNLMPAAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaH AAL78295.1 HpaH precursor Virulence Hrp PAI Protein 6e-36 68
hpaH YP_362172.1 transglycosylase HpaH Virulence Hrp PAI Protein 1e-35 68
hpa2 NP_636615.1 Hpa2 protein Virulence Hrp PAI Protein 7e-36 67
XC_3001 YP_244069.1 Hpa2 protein Virulence Hrp PAI Protein 7e-36 67
hpa2 AAF61278.1 Hpa2 precursor Virulence Hrp PAI Protein 3e-35 66
hpa2 NP_640772.1 Hpa2 protein Virulence Hrp PAI Protein 1e-35 64
unnamed AAC38373.1 rOrf3 Not tested LEE Protein 5e-16 43
ECO103_3629 YP_003223486.1 hypothetical protein Not tested LEE Protein 5e-17 42
unnamed AAK26704.1 unknown Not tested LEE Protein 3e-17 42
ECO26_5260 YP_003232142.1 hypothetical protein Not tested LEE Protein 5e-17 42
unnamed AAL57531.1 unknown Not tested LEE Protein 3e-17 42
st13 CAC81851.1 ST13 protein Not tested LEE II Protein 3e-17 42
unnamed CAI43885.1 hypothetical protein Not tested LEE Protein 3e-17 42
iagB NP_457271.1 cell invasion protein Virulence SPI-1 Protein 7e-13 41
iagB NP_806480.1 cell invasion protein Virulence SPI-1 Protein 7e-13 41
iagB YP_217796.1 cell invasion protein Virulence SPI-1 Protein 7e-13 41
iagB NP_461798.1 invasion protein precursor Virulence SPI-1 Protein 6e-13 41
ECO111_3763 YP_003236099.1 hypothetical protein Not tested LEE Protein 2e-16 41
Z5131 NP_290279.1 hypothetical protein Not tested LEE Protein 2e-16 41
unnamed AAC31524.1 L0045 Not tested LEE Protein 1e-16 41
ECs4579 NP_312606.1 hypothetical protein Not tested LEE Protein 2e-16 41
unnamed ACU09469.1 putative lytic transglycosylase Not tested LEE Protein 1e-16 41
unnamed AAL06358.1 unknown Not tested LEE Protein 1e-17 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BUPH_03877 YP_006835789.1 lytic transglucosyllase catalytic subunit VFG1789 Protein 6e-18 43
BUPH_03877 YP_006835789.1 lytic transglucosyllase catalytic subunit VFG0719 Protein 2e-16 43
BUPH_03877 YP_006835789.1 lytic transglucosyllase catalytic subunit VFG0994 Protein 1e-10 42
BUPH_03877 YP_006835789.1 lytic transglucosyllase catalytic subunit VFG0539 Protein 2e-13 41
BUPH_03877 YP_006835789.1 lytic transglucosyllase catalytic subunit VFG0823 Protein 6e-17 41