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Name : BUPH_03620 (BUPH_03620) Accession : YP_006835371.1 Strain : Genome accession: NC_018695 Putative virulence/resistance : Virulence Product : type IV pilus assembly protein PilB Function : - COG functional category : - COG ID : - EC number : - Position : 3630076 - 3631368 bp Length : 1293 bp Strand : + Note : identified by sequence similarity; putative DNA sequence : ATGCAAGCTTCTTTTCAATCTGCGGCGCCGCTGCGGCCGCTCGCGGCCGACGGCGAAAGCGCCTCCCGCGGCAAGCCCAG CGGGTTCGCCGCTGATTCAGGCGCGGCCACGCTCAACGATTCTGATAACGCCCCCGCCGTGCGTCTGCTGACCGACACGC TGCGTGAGGCGACTCGCCGCAACGCGTCAGACCTTCACATCGAGCCGGCCGAAAACAGCTGGCGAGTGCGGCTGCGTATC GACGGCGTGCTGCACGAATTGGCGCCGCCGCCGGCTCACCTGCGGGACGCCTTCATCACCCGTGTAAAGGTGCTGGCTCG CATGGACATCGCCGAGCGCCGCATACCGCAAGACGGCCGGCTGCGGATCGCGACCTCGCCGGGACGGATCGAGGACTACC GCGTCAATTCGCTGCCCACGCTGTTCGGCGAAAAGCTGGTGCTGCGCCGGCTCGACGCTCTGCCAACCGACCTTTCGCTC GACTCGCTCGGCCTCGACGTCCGCCAACGGCAAACCGTCGATGCGGCCATCCGCGCGCCGCATGGCCTCGTGCTTGTCAC TGGGCCGACTGGCAGCGGCAAGACTCTCTCGCTGTACTGCTTTCTGAATCTGCTCAACAGCGAATCGCGCAATCTCTGTT CGGTGGAAGATCCGGCGGAAATCCAGCTGGCCGGCATCAATCAGGTCAGCGTGCGCGAGAAGGCCGGGCTGACCTTTGCG GTCGCGTTGCGCGCGTTCTTGCGCCAGGACCCGGATGTCGTTATGGTCGGCGAAATCCGCGACGAGGAAACCGCCGACGT CGCCGTGAAAGCCGCACAAACCGGCCACCTGGTTCTCTCGACTTTGCACACGAACGACGCGCCGGCCGCCGTCGCGCGTC TGATCGACATTGGCGTCGAACCGTACAACCTTGCTGCCGCGTTGCGTATGGTGACCGCGCAGCGGCTGGTGCGGCGCCTG TGCGAGGCGTGCCGGGCGCCCGCGCCGCATTCGGCGGCAGCGCTAGAAGCCGCGGGGTTCGCCGACCATCAGCTCGACGG CTGGCAGCCGTATGCGGCGAAGGGCTGCGCGGCATGCCACGGCATCGGTTATCGAGGCCGCGTCGGCATCCATCAGGTGA TGCCGGTATCTGACGCCATGCGTGAGCTGATCGTCGCGCGCGCGAGCACGCATGAGCTCGCGCGACAGGCGCAGAGCGGA GGCGTCCGCACGCTGCGCGATGCCGCGTTGGCCCGCGTGCGCGACGGCACAACGAGCCTCGCCGAGGCACTCGCGGCGAC GGAGGTCGCGTGA Protein sequence : MQASFQSAAPLRPLAADGESASRGKPSGFAADSGAATLNDSDNAPAVRLLTDTLREATRRNASDLHIEPAENSWRVRLRI DGVLHELAPPPAHLRDAFITRVKVLARMDIAERRIPQDGRLRIATSPGRIEDYRVNSLPTLFGEKLVLRRLDALPTDLSL DSLGLDVRQRQTVDAAIRAPHGLVLVTGPTGSGKTLSLYCFLNLLNSESRNLCSVEDPAEIQLAGINQVSVREKAGLTFA VALRAFLRQDPDVVMVGEIRDEETADVAVKAAQTGHLVLSTLHTNDAPAAVARLIDIGVEPYNLAAALRMVTAQRLVRRL CEACRAPAPHSAAALEAAGFADHQLDGWQPYAAKGCAACHGIGYRGRVGIHQVMPVSDAMRELIVARASTHELARQAQSG GVRTLRDAALARVRDGTTSLAEALAATEVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 5e-73 | 48 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-73 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BUPH_03620 | YP_006835371.1 | type IV pilus assembly protein PilB | VFG2426 | Protein | 2e-135 | 76 |
| BUPH_03620 | YP_006835371.1 | type IV pilus assembly protein PilB | VFG0182 | Protein | 5e-76 | 49 |
| BUPH_03620 | YP_006835371.1 | type IV pilus assembly protein PilB | VFG2048 | Protein | 3e-72 | 48 |
| BUPH_03620 | YP_006835371.1 | type IV pilus assembly protein PilB | VFG1876 | Protein | 5e-70 | 45 |
