Gene Information

Name : BUPH_02645 (BUPH_02645)
Accession : YP_006834397.1
Strain :
Genome accession: NC_018695
Putative virulence/resistance : Virulence
Product : type IV secretion system protein VirB4
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2492094 - 2494529 bp
Length : 2436 bp
Strand : -
Note : identified by sequence similarity; putative

DNA sequence :
GTGCCGCTTGCCGACATGATTCCGTATTCGACGCACGTGACGGATCACGTCATCAAGACGCGCGAAGGCGCGTACCTGCA
GATCTGGAAGATTGCAGGTATCGCCTTCGAGGCCGCGGATCCGGCCGACATCCTCGTGCGGCACGACGGATTCAATCAAC
TCGTGCGCGGTCTGCCCGGCGGCCATGTGGCGCTGTGGTCGCACCGGCTGCGCCGCCGTGTCTCGGATCACTTCCCCACG
CCTTATGCAAACCGCTTCTGCCAGACGCTCGCCACGCGCTACTACGCGAGCTTTGCCGGCTACCGCATGATGGCCAACGA
GCTATACCTGACGCTTGTCTATCGGCCCGACCGCACGAAACTCGGCCGAGTGTTCAGCCGCGCCGCGCGCCGCACGCGAG
AGGACATCCAGCGAGGCCAGCATGAAGCGCTCAAGGTCATGAGCGAACTTGCCGCGCAGGTCGAGGCAGGCCTGAAGGCC
TACGACCCGATCGCACTCGGGGTTTATCGCAGGCCGAGCCCCTATGCAAATCGCCCTCGCCGGTATTCGTCGGCGCTGGA
ACTGCTCGGCTATCTCCTCAACGCTGCGTGGGAGGTACAGCCGGTTCCTGCGGGGACGATTCGCGACGCTTTGCCCACGT
CACGCCTCTTTGTCGGCGCCGAAGAGCTCGAAATCCGCATGCCGGGCGAGACCCGTTATGCGGCGATGCTCGACCTGAAG
GACTATTCGGAGGATACCGAGCCGGGGATGCTCAACGGCCTGCTCTACGGCGACTTCGAGTACATCGAGACGCAGAGCTT
CACGATCCTCGACAAGCCGAGCGCGAAGGAGGCGCTCGAGCGGCAACGCAACCAGCTGATCGCCGGCGAGGACGTCGCGG
TGTCCCAGGTCGAAGCGATGGATCGGGCGCTTGACGACCTGATCAACGGCGACTTCGTCCTCGGCGAATATCACTACTCG
CTGGCGGTGCTCGGCGACACACTGGGCGAGGTATCGAGAAGTGTCGTGAAGGCCCGCACACAGCTGGCCGACGCCGGATT
CCAGACGGCCCTCGTCGATCTCGTGGCAGATGCGGCGTGGTTTGCGCAACTGCCGGGCAACTGGCGCTACCGGCCGCGAG
AAGCGAAGCTCACGTCGCGCAATTTCTGCGGCCTTTCGAGCCTGCACAATTTTGCGACCGGCAAGCGCGACGGCAATCCA
TGGGGCGAGGCGATCACGATCGTCAAGACGCCCAGCGGCCAGCCGCTCTATCTGAATTTCCACGTCACGCCCGAGAAGCA
CGACTCGGCCGACGAGAAGGCGCTCGCGAATACCCAGATCATCGGCCAGGCCGGTGCGGGCAAGACCGTGCTCGAACTCT
TCCTGCTCGCCATGGCCATGAAGTACGGCATCACGGCCGTGCTGTACGACAAGGATCGGGGTACCGAGATTGCGATTCGC
GCAATGGGCGGCACGTATACGGTGTTCCGCCGTGGCGAGCCGACCGGGCTTAACCCGTTCCAGATGGCGCCCAACGAGTC
CGTGCTCGATTTTTGGGAGCGGCTCGTGCGCAAGCTCGTTGATAGCGGCATGCCGCTCTCCGCAAAGGACGAACTGGACA
TCTCACGCGCGGTGCGCGAAGTCGCCCGCATGGACAAATCGCTGCGGTGCCTGTCCATCGTGCGGCAACTGCTGCCGAAC
GTGGGGGAGAACAGCCTGCACGCGCGTCTGACGAAATGGTGCACGGGCGGGCGCCTGGGCTGGGTGCTCGACAACCCGAC
GGACCACATCGATCTCGCGCGCTCGGGCCTGTTCGGGTTCGATGACACAGAGCTGCTCGATGATGCCGAGATCTCGACGC
CGGTGACGATGTACCTGCTCTATAGGACGGAAAGCCTTATCGACGGCCGGCGCTTCGTCTACGTGATGACCGAATTCTGG
AAACGGCTTGCCGATCCCGTTTTCACCGATTTTGCGAAGAACAAGCAGAAGACGATCCGCAAGCAGAACGGACTGGGCAT
CTTCGACACGCAGTCACCGGCCGACGTGCTGGGGAGCGATATTGCGCGTGCGCTCATCGAGCAGAGCGCAACCTTCTTCT
TTCTGCCGAACCCGAGGGCGGATTACGACGACTACGTACACGGCTTCAAGCTTACCGAGGCCGAATTCAATATCGTGCGG
AGCCTCGGCGAGCACAGCCGGATGTTCCTGATCAAGCAGGGGCATCGTTCGGCGATCGGCCGTCTCGACCTGTCAGGGCT
CGGCGATGTTCTCGATGTGCTGTCCGGCACGACGGACAACGTGGAACTGCTCGACACGATCCGCGCGCGGGTCGGCGACG
ACCCCGACGCGTGGCTGCCTGTTTTCCACGCGCAGCTGGCCAGGCGCCGCGTGCAGCTCGCGCGCCAGGAGGGATCGCCA
CCAGCGGGATCACCCCTAGCCGGAGGTGCTCGATGA

Protein sequence :
MPLADMIPYSTHVTDHVIKTREGAYLQIWKIAGIAFEAADPADILVRHDGFNQLVRGLPGGHVALWSHRLRRRVSDHFPT
PYANRFCQTLATRYYASFAGYRMMANELYLTLVYRPDRTKLGRVFSRAARRTREDIQRGQHEALKVMSELAAQVEAGLKA
YDPIALGVYRRPSPYANRPRRYSSALELLGYLLNAAWEVQPVPAGTIRDALPTSRLFVGAEELEIRMPGETRYAAMLDLK
DYSEDTEPGMLNGLLYGDFEYIETQSFTILDKPSAKEALERQRNQLIAGEDVAVSQVEAMDRALDDLINGDFVLGEYHYS
LAVLGDTLGEVSRSVVKARTQLADAGFQTALVDLVADAAWFAQLPGNWRYRPREAKLTSRNFCGLSSLHNFATGKRDGNP
WGEAITIVKTPSGQPLYLNFHVTPEKHDSADEKALANTQIIGQAGAGKTVLELFLLAMAMKYGITAVLYDKDRGTEIAIR
AMGGTYTVFRRGEPTGLNPFQMAPNESVLDFWERLVRKLVDSGMPLSAKDELDISRAVREVARMDKSLRCLSIVRQLLPN
VGENSLHARLTKWCTGGRLGWVLDNPTDHIDLARSGLFGFDDTELLDDAEISTPVTMYLLYRTESLIDGRRFVYVMTEFW
KRLADPVFTDFAKNKQKTIRKQNGLGIFDTQSPADVLGSDIARALIEQSATFFFLPNPRADYDDYVHGFKLTEAEFNIVR
SLGEHSRMFLIKQGHRSAIGRLDLSGLGDVLDVLSGTTDNVELLDTIRARVGDDPDAWLPVFHAQLARRRVQLARQEGSP
PAGSPLAGGAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trwK YP_001610476.1 TrwK protein Virulence Not named Protein 2e-169 46
trwK CAD42844.1 TrwK protein Not tested trw-PAI Protein 2e-169 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BUPH_02645 YP_006834397.1 type IV secretion system protein VirB4 VFG2211 Protein 0.0 49
BUPH_02645 YP_006834397.1 type IV secretion system protein VirB4 VFG2259 Protein 6e-170 45
BUPH_02645 YP_006834397.1 type IV secretion system protein VirB4 VFG0018 Protein 3e-157 44