Gene Information

Name : BUPH_06384 (BUPH_06384)
Accession : YP_006832350.1
Strain :
Genome accession: NC_018695
Putative virulence/resistance : Unknown
Product : TnpC protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 18996 - 20588 bp
Length : 1593 bp
Strand : +
Note : identified by sequence similarity; putative

DNA sequence :
ATGACGCGCGCGAACCCACTTCCCGACGATGTCGAAACGCTGAAGGCCATGCTGCTCAGCCAGGAGGAGGCGCTGCGCGA
GCGAGACACGCAAGTGCTCAAACTGCAGGAAACGGTCGACTCGCAACAAGCCGCGTTGGCTTCGCGCACAGCCGAAGTCG
AACACCTGAAGCTGCTCATTGCCAAGCTGCGCCGTATGCAGTTCGGTCGCAAGTCCGAGAAGCTTGACCATCAGATCGAA
CAACTCGAGCTGCGCCTCGAAGAGCTGGAGGCCGACGAGGGTGCCGCGCCGGTCGAAATCCCGAAGACGCCACGCAAGGC
TTTGGAGCAGGCACCGCGCAAGCCACTGCCTGAACATCTGCCCCGCGAGATCCGGACGCACCTGCCTGAATCCGCCGGGA
AGTGCACGCAGTGTGGTGGCGAGATGAAGTCGCTGGGCGAAGACGTCGCCGAACAGCTGGAGTATGTACCGGCAAGCTTC
CGGGTCATCCGTCATGTGCGCCCCAAGTTTGCCTGCGTGTGTTGCGACCACATCGCTCAGGCGCCTGCACCGAGCCGCCC
CATCGAACGCGGTCTCGCCGGCCCGGGGCTACTGGCACACGTACTGGTCTCGAAGTTTGCAGACCACGTGCCGCTTTACC
GGCAGTCGGTCATGTATGCACGCGAAGGCGTCGAGCTGGATCGCTCGCTGCTTGCGAAGTGGGTCGGTCACGCGGCGACG
CTGCTGCAGCCGCTCGTTGAAACGCTGCGTCGACACGTGATGTTGGCGACGAAACTGCACGCCGACGACACGCCGGTTCC
AGTGCTTGCACCGGGCAACGGCAAGACGAAGACCGGGCGCTTGTGGGTGTACGTGCGCGATGACCGTGCATCGGCTGACA
TGACACCGCCGGCGGTGTGGTTCGCCTATACGCCGGATCGCAAGAGTATCCATCCGCAGCAGCACCTCGGGTCGTTCAAC
GGTACGCTGCAAGCCGATGCATACGGTGGCTACCAGGCCATCTACGAAACCGGGCGCGTCACGGAGGCAGCTTGCTGGGC
GCACGCCCGGCGCCAGTTCTATGAATTGCACGCAGCGCGCCCCAATGCGTTGAACACCGAAGCGCTCGAACGTATCGGCG
CGCTTTACAGGATTGAGGAGACGATCAGGGGCAAGCCGCCCGACCAACGCAGTGCGCATCGTCAGGCGCATGCGCGGCCG
CTACTCGATCAATTCCACGCGTGGCTCACCACGACGCTGGAAACGCTCTCGCGCAAATCGGACACGAGTCGGGCGATCCT
CTATGCGCTGAACCGGTGGGAAGCGCTCACACGCTATTGTGGTGACGGGCAACTGGAGATTGACAATCTACCTGTCGAAC
GCGCGTTGCGCGGGGTGGCCATCGGTCGCCGCAACTATCTGTTCGCTGGAGCAGACTCTGGTGGAGAACGTGCCGCCGCG
ATCTACAGCCTCATTGGGACCGCAAAACTCAACGGCATCGATCCTGAGGCGTATCTGCGCTACGTGCTTGCACGCATCGC
CGACCATGCGATCAATCGCATCGACGAACTTGCACCGTGGGTCGTTGCCGCTCAGCTCCGCACCACAGTCTGA

Protein sequence :
MTRANPLPDDVETLKAMLLSQEEALRERDTQVLKLQETVDSQQAALASRTAEVEHLKLLIAKLRRMQFGRKSEKLDHQIE
QLELRLEELEADEGAAPVEIPKTPRKALEQAPRKPLPEHLPREIRTHLPESAGKCTQCGGEMKSLGEDVAEQLEYVPASF
RVIRHVRPKFACVCCDHIAQAPAPSRPIERGLAGPGLLAHVLVSKFADHVPLYRQSVMYAREGVELDRSLLAKWVGHAAT
LLQPLVETLRRHVMLATKLHADDTPVPVLAPGNGKTKTGRLWVYVRDDRASADMTPPAVWFAYTPDRKSIHPQQHLGSFN
GTLQADAYGGYQAIYETGRVTEAACWAHARRQFYELHAARPNALNTEALERIGALYRIEETIRGKPPDQRSAHRQAHARP
LLDQFHAWLTTTLETLSRKSDTSRAILYALNRWEALTRYCGDGQLEIDNLPVERALRGVAIGRRNYLFAGADSGGERAAA
IYSLIGTAKLNGIDPEAYLRYVLARIADHAINRIDELAPWVVAAQLRTTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 1e-153 65
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 1e-122 57
unnamed AAC31494.1 L0015 Not tested LEE Protein 9e-130 56
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 4e-130 56
tnp AEA34686.1 transposase Not tested Not named Protein 7e-131 56
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 1e-129 56
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 1e-129 56
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 5e-130 56
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 1e-129 55
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 8e-129 55
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 8e-129 55
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 4e-129 55
unnamed AAL57570.1 unknown Not tested LEE Protein 1e-129 55
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 2e-127 52
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 2e-112 52
unnamed AAL08460.1 unknown Not tested SRL Protein 5e-104 49
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 4e-118 49
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 4e-118 49
tnp AEA34687.1 IS66 family transposase Not tested Not named Protein 6e-88 48
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 4e-110 47
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 3e-110 47
RL059 AAP84184.1 transposase Not tested PAPI-1 Protein 1e-85 41
tnpC AEZ06051.1 transposase Not tested Tn6167 Protein 1e-79 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BUPH_06384 YP_006832350.1 TnpC protein VFG0793 Protein 5e-130 56
BUPH_06384 YP_006832350.1 TnpC protein VFG1051 Protein 3e-104 49
BUPH_06384 YP_006832350.1 TnpC protein VFG1736 Protein 2e-94 48