Gene Information

Name : MC28_5402 (MC28_5402)
Accession : YP_006832223.1
Strain : Bacillus thuringiensis MC28
Genome accession: NC_018693
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5360733 - 5361734 bp
Length : 1002 bp
Strand : +
Note : -

DNA sequence :
GTGAAAAGTAAATTGTTAAAAGGTGTACTTAGCTTTGGGATTGGTTTAGGAGCTTTATATAGCGGATCTTCAGCTCAAGC
AGAAACGCCTACAAATCAAAATAATACGTTAAAAGTGATGACGCATAACGTGTACATGCTATCAACAAACTTATATCCGA
ATTGGGGACAAAGTGAGCGTGCTGATTTAATTGGAGCGGCAGATTATATAAAGAATCAGGACGTTGTTATATTAAATGAA
GTGTTTGATAATAGCGCCTCAGATCGTTTGTTAGGAAATTTGAAGAGAGAATATCCAAATCAAACGGCGGTATTAGGTCG
TAGTAGTGGAAATGAATGGGATAAAACATTAGGGAACTATTCATCTTCGACTCCTGAAGATGGGGGCGTTGCGATTGTGA
GTAAATGGCCAATCGTTGAAAAAATTCAATATGTATTCGAAAAAGGCTGTGGACCAGATAATTTATCAAATAAAGGATTT
GTATACACGAAAATTAAGAAAAATGATAGTTTTGTTCATGTAATTGGGACGCATTTACAAGCTGAAGATAGTATGTGTGG
AAAAACTTCACCTGCATCTGTACGTACAAAACAGCTACAAGAAATGCAAGATTTTATTAAAAATAAAAATATACCAAATA
ACGAGTATGTGTTAATTGGCGGAGATATGAACGTAAATAAAATAAACGCTGAGAATAATAGTGATTCAGAGTATGCATCT
ATGTTTAAAACATTACACGCTTCTATTCCATCTTATACTGGACATACAGCGACTTGGGATGCGACGACAAACAGTATTTC
GAAATACAATTTCCCCGATAGCCCTGCCGAGTATTTAGATTATATTATTGCAAGTAAAGATCATGCGAACCCATCGCATA
TAGAAAATAAAGTGTTACAGCCGAAATCTCCACAATGGACTGTTACATCATGGTTTAAAAAATATACGTATAATGATTAC
TCTGATCATTATCCAGTAGAGGCTACTATTTCTATGAAGTAG

Protein sequence :
MKSKLLKGVLSFGIGLGALYSGSSAQAETPTNQNNTLKVMTHNVYMLSTNLYPNWGQSERADLIGAADYIKNQDVVILNE
VFDNSASDRLLGNLKREYPNQTAVLGRSSGNEWDKTLGNYSSSTPEDGGVAIVSKWPIVEKIQYVFEKGCGPDNLSNKGF
VYTKIKKNDSFVHVIGTHLQAEDSMCGKTSPASVRTKQLQEMQDFIKNKNIPNNEYVLIGGDMNVNKINAENNSDSEYAS
MFKTLHASIPSYTGHTATWDATTNSISKYNFPDSPAEYLDYIIASKDHANPSHIENKVLQPKSPQWTVTSWFKKYTYNDY
SDHYPVEATISMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlb NP_646757.1 truncated beta-hemplysin Not tested ¥ÕSa3 Protein 2e-70 58
hlb NP_375112.1 hypothetical protein Not tested ¥ÕSa3 Protein 2e-70 57
truncated-hlb NP_372527.1 hypothetical protein Not tested ¥ÕSa3 Protein 2e-70 57
unnamed CAA70683.2 sphingomyelinase-c Virulence LIPI-2 Protein 3e-78 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MC28_5402 YP_006832223.1 hypothetical protein VFG1798 Protein 9e-78 57
MC28_5402 YP_006832223.1 hypothetical protein VFG0674 Protein 2e-78 55