Gene Information

Name : MC28_5294 (MC28_5294)
Accession : YP_006832115.1
Strain : Bacillus thuringiensis MC28
Genome accession: NC_018693
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5239284 - 5239970 bp
Length : 687 bp
Strand : +
Note : -

DNA sequence : 
ATGGAAGGTGAGAATATGCGCTTACTTGTAGTAGAAGATAATGCTTCGTTATTAGAGTCTATCGTACAAATTTTGCGTGA
TGAATTTGAAGTAGATACAGCGTTAAATGGAGAAGATGGATTGTTTTTGGCAATGCAAAACATTTATGATGCAATTTTAC
TTGATGTGATGATGCCAGGAATGGACGGGTTTGAAGTAATTCAAAAAATACGTGATGAAAGAATTGAAACGCCAGTCCTG
TTTTTAACAGCGAGAGATTCTTTAGAAGATCGAGTGAAAGGATTGGATTTTGGCGGAGACGACTATATCGTAAAGCCGTT
TCAAGCACCAGAACTAAAGGCGAGAATTCGTGCTTTATTACGCAGAAGTGGTAGTTTAACAACAAAGCAGACAATTCGAT
ATAAAGGAATTGAATTGTTTGGAAAAGATAAAGATGTTCAAGTAGAGGGACAAGATATTAAGTTGACATTAAAACAATAT
GAGCTTTTAGAGTATCTCATTCAAAATAGCGGAAAGATTTTAATGCGTGAACAAATTTTCGATCGTGTTTGGGGATTTGA
TTCAGATACGACAGTAGCAATTGTAGAAGTGTATGTGCATCATTTACGTAAAAAATTAGAGCCATTCGGTTATCAGAAAG
ATATTCAAACTGTTCGTGGTATTGGATATATATTAAAAGAGAAATGA

Protein sequence : 
MEGENMRLLVVEDNASLLESIVQILRDEFEVDTALNGEDGLFLAMQNIYDAILLDVMMPGMDGFEVIQKIRDERIETPVL
FLTARDSLEDRVKGLDFGGDDYIVKPFQAPELKARIRALLRRSGSLTTKQTIRYKGIELFGKDKDVQVEGQDIKLTLKQY
ELLEYLIQNSGKILMREQIFDRVWGFDSDTTVAIVEVYVHHLRKKLEPFGYQKDIQTVRGIGYILKEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-35 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-34 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MC28_5294 YP_006832115.1 hypothetical protein BAC0125 Protein 2e-36 46
MC28_5294 YP_006832115.1 hypothetical protein BAC0638 Protein 7e-34 44
MC28_5294 YP_006832115.1 hypothetical protein NC_003923.1003417.p0 Protein 7e-42 42
MC28_5294 YP_006832115.1 hypothetical protein NC_013450.8614146.p0 Protein 7e-42 42
MC28_5294 YP_006832115.1 hypothetical protein NC_002951.3238224.p0 Protein 7e-42 42
MC28_5294 YP_006832115.1 hypothetical protein NC_007793.3914065.p0 Protein 7e-42 42
MC28_5294 YP_006832115.1 hypothetical protein NC_002758.1121390.p0 Protein 7e-42 42
MC28_5294 YP_006832115.1 hypothetical protein NC_010079.5776364.p0 Protein 7e-42 42
MC28_5294 YP_006832115.1 hypothetical protein NC_002952.2859858.p0 Protein 7e-42 42
MC28_5294 YP_006832115.1 hypothetical protein AE015929.1.gene1106. Protein 4e-36 42
MC28_5294 YP_006832115.1 hypothetical protein NC_007622.3794948.p0 Protein 7e-42 42
MC28_5294 YP_006832115.1 hypothetical protein BAC0308 Protein 5e-33 42
MC28_5294 YP_006832115.1 hypothetical protein BAC0083 Protein 6e-39 41
MC28_5294 YP_006832115.1 hypothetical protein BAC0197 Protein 4e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MC28_5294 YP_006832115.1 hypothetical protein VFG0596 Protein 1e-35 43
MC28_5294 YP_006832115.1 hypothetical protein VFG1390 Protein 9e-39 43
MC28_5294 YP_006832115.1 hypothetical protein VFG1386 Protein 3e-42 43
MC28_5294 YP_006832115.1 hypothetical protein VFG1389 Protein 4e-37 42