Gene Information

Name : MC28_4098 (MC28_4098)
Accession : YP_006830919.1
Strain : Bacillus thuringiensis MC28
Genome accession: NC_018693
Putative virulence/resistance : Resistance
Product : RNA-binding S4 domain-containing protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3968796 - 3969485 bp
Length : 690 bp
Strand : -
Note : -

DNA sequence :
ATGTCAAAAAACATTTTAATTGTTGAAGATGAAGATATATTACGTGAAATATTAAAGGACTATTTTTTAAGTGAACAATA
TGTAGTGTTTGAAGCAAGGGACGGGAAAGAAGCTTTAGTTGTATTTGAAGAAGAAGAGGTTGATTTAGTTATTTTAGATA
TTATGTTGCCGGAACTCGATGGATGGTCTGTTTGCCGAAGAATTCGGAAGACGTCCGAGGTGCCTATTATTATGTTGACG
GCGCGCGTAGATGAAGATGATACGTTACTTGGTTTTGAACTTGGAGCAGATGACTATGTGACGAAGCCGTACAGTCCACC
AATTTTATTAGCAAGAGCGAAACGATTATTAGAAAGTAGAAAAGCATCGAAGAAACCTTTAGAGAATGAAGATGATACGT
TATCAATTCATGGTATCCACGTTCATTTTCCATCACGTACTGTTACTGTTGATGAGGTAGATGTTAGTTTAACGCATACG
GAGTTTGAAATATTGGTGTATTTCATGAAAAACCAAGGAATTGTACTAACAAGGGAACAATTAATTTCAAGAATTTGGGG
ATATGAATTTGCCGGTGATGACCGAACGGTTAATAGCCATATTCGTAATTTAAGAAATAAATTAGGAGAGAAAGCAAAGT
ACATTACAACTGTAGTGCGAACTGGATATAAGTTTGAGGGGAATGTATGA

Protein sequence :
MSKNILIVEDEDILREILKDYFLSEQYVVFEARDGKEALVVFEEEEVDLVILDIMLPELDGWSVCRRIRKTSEVPIIMLT
ARVDEDDTLLGFELGADDYVTKPYSPPILLARAKRLLESRKASKKPLENEDDTLSIHGIHVHFPSRTVTVDEVDVSLTHT
EFEILVYFMKNQGIVLTREQLISRIWGYEFAGDDRTVNSHIRNLRNKLGEKAKYITTVVRTGYKFEGNV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 2e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MC28_4098 YP_006830919.1 RNA-binding S4 domain-containing protein NC_002952.2859905.p0 Protein 2e-32 45
MC28_4098 YP_006830919.1 RNA-binding S4 domain-containing protein NC_007622.3794472.p0 Protein 2e-32 45
MC28_4098 YP_006830919.1 RNA-binding S4 domain-containing protein NC_002758.1121668.p0 Protein 2e-32 45
MC28_4098 YP_006830919.1 RNA-binding S4 domain-containing protein NC_009641.5332272.p0 Protein 2e-32 45
MC28_4098 YP_006830919.1 RNA-binding S4 domain-containing protein NC_013450.8614421.p0 Protein 2e-32 45
MC28_4098 YP_006830919.1 RNA-binding S4 domain-containing protein NC_007793.3914279.p0 Protein 2e-32 45
MC28_4098 YP_006830919.1 RNA-binding S4 domain-containing protein NC_003923.1003749.p0 Protein 2e-32 45
MC28_4098 YP_006830919.1 RNA-binding S4 domain-containing protein NC_002745.1124361.p0 Protein 2e-32 45
MC28_4098 YP_006830919.1 RNA-binding S4 domain-containing protein NC_009782.5559369.p0 Protein 2e-32 45
MC28_4098 YP_006830919.1 RNA-binding S4 domain-containing protein NC_002951.3237708.p0 Protein 2e-32 45
MC28_4098 YP_006830919.1 RNA-binding S4 domain-containing protein NC_012469.1.7686381. Protein 5e-33 43
MC28_4098 YP_006830919.1 RNA-binding S4 domain-containing protein NC_012469.1.7685629. Protein 2e-30 43
MC28_4098 YP_006830919.1 RNA-binding S4 domain-containing protein AF310956.2.orf0.gene Protein 9e-29 41