Gene Information

Name : MC28_3948 (MC28_3948)
Accession : YP_006830769.1
Strain : Bacillus thuringiensis MC28
Genome accession: NC_018693
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3830252 - 3830950 bp
Length : 699 bp
Strand : -
Note : -

DNA sequence : 
GTGAGTAAATTGAAAAGAATCTTACTAATAGAAGATGAAGTAAGTATTGCAGAATTACAGCGAGATTATTTAGAAATTAG
TGATTTTCAAGTTGATGTAGAGCATTCTGGAGAAATAGGCTTACAAATGGCCTTGCAAGAAAACTATGATTTAATTATTT
TAGATATTATGCTTCCGAAAATGAACGGATTCGAAATTTGTAAACAAATACGTGCTATAAAAGATATTCCGATTTTACTT
GTTTCAGCTAAAAAAGAAGATATAGATAAAATTCGTGGACTCGGATTAGGAGCGGATGATTATATAACGAAACCGTTTAG
CCCAAGTGAATTAGTTGCAAGGGTAAAGGCACATATTTCTCGTTATGAAAGATTATCAGGAAATGTAAGTAAGCAACGTG
ATACGTTATATATTCATGGAATCTCTATCGATCAACGAGCGAGGAAAGTTTTTATAAACAATGAAGAAATCGCGTTTACA
ACGAAGGAATTTGATTTATTAACATTCTTTGTAACGCACCCAAACCAAGTATTAAATAAAGAACAGTTATTTGAACGCAT
TTGGGGATTAGATTCTGCTGGCGATTTAGCTACTGTTGTCGTTCACATTAGAAAGTTACGTGAAAAAATTGAAAGAGATC
CTGCCCACCCGCAATATATTGAAACGGTATGGGGAGCTGGTTATCGTTTTAATGTGTAG

Protein sequence : 
MSKLKRILLIEDEVSIAELQRDYLEISDFQVDVEHSGEIGLQMALQENYDLIILDIMLPKMNGFEICKQIRAIKDIPILL
VSAKKEDIDKIRGLGLGADDYITKPFSPSELVARVKAHISRYERLSGNVSKQRDTLYIHGISIDQRARKVFINNEEIAFT
TKEFDLLTFFVTHPNQVLNKEQLFERIWGLDSAGDLATVVVHIRKLREKIERDPAHPQYIETVWGAGYRFNV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 2e-43 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MC28_3948 YP_006830769.1 hypothetical protein AE016830.1.gene1681. Protein 3e-46 46
MC28_3948 YP_006830769.1 hypothetical protein FJ349556.1.orf0.gene Protein 3e-43 44
MC28_3948 YP_006830769.1 hypothetical protein NC_012469.1.7686381. Protein 9e-40 43
MC28_3948 YP_006830769.1 hypothetical protein AM180355.1.gene1830. Protein 2e-39 43
MC28_3948 YP_006830769.1 hypothetical protein NC_002758.1121390.p0 Protein 4e-37 42
MC28_3948 YP_006830769.1 hypothetical protein NC_010079.5776364.p0 Protein 4e-37 42
MC28_3948 YP_006830769.1 hypothetical protein NC_002952.2859858.p0 Protein 4e-37 42
MC28_3948 YP_006830769.1 hypothetical protein NC_007622.3794948.p0 Protein 4e-37 42
MC28_3948 YP_006830769.1 hypothetical protein NC_003923.1003417.p0 Protein 4e-37 42
MC28_3948 YP_006830769.1 hypothetical protein NC_013450.8614146.p0 Protein 4e-37 42
MC28_3948 YP_006830769.1 hypothetical protein NC_002951.3238224.p0 Protein 4e-37 42
MC28_3948 YP_006830769.1 hypothetical protein NC_007793.3914065.p0 Protein 4e-37 42
MC28_3948 YP_006830769.1 hypothetical protein AE015929.1.gene1106. Protein 8e-34 42
MC28_3948 YP_006830769.1 hypothetical protein AF155139.2.orf0.gene Protein 1e-43 42
MC28_3948 YP_006830769.1 hypothetical protein NC_002952.2859905.p0 Protein 2e-41 41
MC28_3948 YP_006830769.1 hypothetical protein HE999704.1.gene2815. Protein 2e-41 41
MC28_3948 YP_006830769.1 hypothetical protein NC_002951.3237708.p0 Protein 2e-41 41
MC28_3948 YP_006830769.1 hypothetical protein NC_003923.1003749.p0 Protein 2e-41 41
MC28_3948 YP_006830769.1 hypothetical protein NC_002758.1121668.p0 Protein 2e-41 41
MC28_3948 YP_006830769.1 hypothetical protein NC_007622.3794472.p0 Protein 2e-41 41
MC28_3948 YP_006830769.1 hypothetical protein NC_009641.5332272.p0 Protein 2e-41 41
MC28_3948 YP_006830769.1 hypothetical protein NC_013450.8614421.p0 Protein 2e-41 41
MC28_3948 YP_006830769.1 hypothetical protein AF130997.1.orf0.gene Protein 1e-35 41
MC28_3948 YP_006830769.1 hypothetical protein NC_007793.3914279.p0 Protein 2e-41 41
MC28_3948 YP_006830769.1 hypothetical protein NC_002745.1124361.p0 Protein 2e-41 41
MC28_3948 YP_006830769.1 hypothetical protein NC_009782.5559369.p0 Protein 2e-41 41
MC28_3948 YP_006830769.1 hypothetical protein EU250284.1.orf4.gene Protein 6e-40 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MC28_3948 YP_006830769.1 hypothetical protein VFG1563 Protein 1e-43 41