Gene Information

Name : MC28_2437 (MC28_2437)
Accession : YP_006829258.1
Strain : Bacillus thuringiensis MC28
Genome accession: NC_018693
Putative virulence/resistance : Virulence
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2381357 - 2382895 bp
Length : 1539 bp
Strand : -
Note : -

DNA sequence :
GTGATTTTTCTGAAAATTACGAAAAATAATAAAAAAATAAAATTCCTAGCATGTGTATTAGTTAGTTTATGCACTATTCA
TTATTCATCTATTTCTTTCGCGGAAACGCAAACAGGTAATGCAACTGATGCAACAAAAAATGCTAGTGACATTAATAATG
GTATAGCAAATTTAAAGTATGATAGTAGAGATATTTTAGCAGTAAATGGTGATAAAGTAGTGAGTTTTGTTCCGAAAGAA
AGTATCAATTCAAATGGTAAATTTGTAGTAGTTGAGCGTGAAAAAAAATCACTTACAACGTCACCGGTCGATATTTCGAT
TATTGATTCTGTAGCTAATCGTACGTATCCAGGAGCAGTACAACTTGCAAATAAAGCTTTTGCCGATAATCAACCTAGTT
TATTAGTGGCTAAGAGAAAACCTTTAAATATTAGTATAGACTTACCTGGAATGAGGAAAGAAAATACGATAGCTGTCCAA
AATCCGACATATGGTAATGTGTCTGGAGCAGTAGATGATTTAGTGTCTACTTGGAATGAGAAGTATGCATCAACACATTC
GTTACCTGCAAGAATGCAGTATACAGAGTCCATGGTGTATAGTAAATCACAAATCGCAAGTACTCTTAATGTCAACGCTA
AATATCTTGATAACAGTCTAAACATTGACTTTAATGCCGTTGCAAATGGAGAGAAAAAAGTGATGGTTGCAGCATATAAG
CAAATATTTTATACCGTAAGTGCTGAACTACCTAACAATCCATCAGATCTTTTTGATAATAGTGTTACTTTCGGTGAGTT
AACTCGTAAAGGGATAAGTAATGCGGCTCCGCCTGTTATGGTGTCAAATGTAGCCTATGGCAGAACCATTTATGTGAAAT
TAGAAACAACATCTAAGAGCAAAGATGTACAAGCTGCTTTTAAAGCGTTACTTAAAAATAACAGCGTCGAAACGAGTGGA
CAGTACAAAGATATTTTTGAAGAAAGTACCTTTACCGCTGTAGTATTAGGCGGAGATGCAAAAGAGCATAACAAGGTTGT
TACAAAAGATTTTAATGAAATCCGAAATATCATTAAAGATAATGCAGAGTTAAGTAAAAAAAATCCAGCATACCCAATTT
CATATACGAGCACTTTCTTAAAAGATAATGCAACTGCTGCTGTTCATAACAATACAGATTATGTTGAGACTACAACTACA
GAATATTCAAGTGCTAAAATGACGCTTGATCATTACGGTGCATATGTTGCTCAATTTGATGTATCTTGGGATGAATTCTC
ATATGATCAAAATGGGAAAGAAGTACTAACACATAAAACTTGGGAAGGAAGCGGCAGAGATAAAACTGCTCACTTCTCTA
CAGTTATACCACTTCCACCGAATTCAAAAAATGTAAAAGTCGTAGCGAGAGAATGTACAGGTCTTGCATGGGAATGGTGG
AGAACAATTATTAATGAACAAAATGTTCCATTAACAAATGAAATAAAGGTTTCAATTGGAGGAACGACATTATACCCAAC
TGCTAATATTAGTCATTAG

Protein sequence :
MIFLKITKNNKKIKFLACVLVSLCTIHYSSISFAETQTGNATDATKNASDINNGIANLKYDSRDILAVNGDKVVSFVPKE
SINSNGKFVVVEREKKSLTTSPVDISIIDSVANRTYPGAVQLANKAFADNQPSLLVAKRKPLNISIDLPGMRKENTIAVQ
NPTYGNVSGAVDDLVSTWNEKYASTHSLPARMQYTESMVYSKSQIASTLNVNAKYLDNSLNIDFNAVANGEKKVMVAAYK
QIFYTVSAELPNNPSDLFDNSVTFGELTRKGISNAAPPVMVSNVAYGRTIYVKLETTSKSKDVQAAFKALLKNNSVETSG
QYKDIFEESTFTAVVLGGDAKEHNKVVTKDFNEIRNIIKDNAELSKKNPAYPISYTSTFLKDNATAAVHNNTDYVETTTT
EYSSAKMTLDHYGAYVAQFDVSWDEFSYDQNGKEVLTHKTWEGSGRDKTAHFSTVIPLPPNSKNVKVVARECTGLAWEWW
RTIINEQNVPLTNEIKVSIGGTTLYPTANISH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
slo YP_281505.1 streptolysin O Virulence Not named Protein 1e-151 62
hly AAA69525.1 listeriolysin O Virulence LIPI-1 Protein 1e-102 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MC28_2437 YP_006829258.1 riboflavin biosynthesis protein RibD VFG2275 Protein 2e-173 69
MC28_2437 YP_006829258.1 riboflavin biosynthesis protein RibD VFG0976 Protein 5e-152 62
MC28_2437 YP_006829258.1 riboflavin biosynthesis protein RibD VFG1363 Protein 2e-103 44
MC28_2437 YP_006829258.1 riboflavin biosynthesis protein RibD VFG0074 Protein 9e-103 42