Gene Information

Name : AMBLS11_04410 (AMBLS11_04410)
Accession : YP_006823925.1
Strain : Alteromonas macleodii Black Sea 11
Genome accession: NC_018692
Putative virulence/resistance : Virulence
Product : KpsT protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1036357 - 1037031 bp
Length : 675 bp
Strand : -
Note : COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component

DNA sequence : 
ATGATAAGAATTGAGAATTTAACTAAGAGCTACCCCAGTAAAATGGGCCCTCAATATATTTTCAAAAATTTGAATTTTGA
TTTCCCAACGGAAAATAATGTCGCAATTTTAGGTAAAAACGGTGCAGGTAAATCCACCCTTTTCCGAATGCTAGCGAAAA
GTGAATACCCTGACAAAGGGCGCGTTTTAACAAACAAGTCCATGTCTTGGCCTGTAGCGCTTCAAACAGGTGTTCACCCA
CAAATGACGGGGCGCGAAAATACGCGATTCGTTGGCCGAATTAATAACGTTAAATCGCTACCTGAATACGAAGAGAGAGT
GCAAGAGTTCGCCGAACTCGGGGCGCGTTTCGACCTTCCTGTTCGAACCTACTCTTCGGGTATGCGCGCCAAACTCGTGT
TTGCGTGCTGTATGAATATCAATTTTGATATTTATCTTATCGATGAAGCAACCTCAGTAGGCGATCCGCTATTCAGAAAA
AAAGCGCGTTTGTCACTAAAAGAAAAAAGTGAACAAGCGGGCGTTATTATGGTTAGCCATGAACTCGACCAAATCCGCGA
ATTCTGTACGTCTGCCGTTATCATAGATGAGGGCAAACTTACTTATTATCACGATCTCGAAGAAGGCATCGACGTTTATA
CGCAGGATGCAGACAATAAGAAATCACTTAAATAG

Protein sequence : 
MIRIENLTKSYPSKMGPQYIFKNLNFDFPTENNVAILGKNGAGKSTLFRMLAKSEYPDKGRVLTNKSMSWPVALQTGVHP
QMTGRENTRFVGRINNVKSLPEYEERVQEFAELGARFDLPVRTYSSGMRAKLVFACCMNINFDIYLIDEATSVGDPLFRK
KARLSLKEKSEQAGVIMVSHELDQIREFCTSAVIIDEGKLTYYHDLEEGIDVYTQDADNKKSLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 8e-45 46
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 3e-45 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AMBLS11_04410 YP_006823925.1 KpsT protein VFG1449 Protein 3e-45 46
AMBLS11_04410 YP_006823925.1 KpsT protein VFG2563 Protein 7e-37 41