Gene Information

Name : AMBLS11_18020 (AMBLS11_18020)
Accession : YP_006826624.1
Strain : Alteromonas macleodii Black Sea 11
Genome accession: NC_018692
Putative virulence/resistance : Resistance
Product : bacteriocin production protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4249892 - 4250476 bp
Length : 585 bp
Strand : +
Note : COG1961 Site-specific recombinases, DNA invertase Pin homologs

DNA sequence :
ATGACAGGTCAACTTATCGGTTACGCACGAGTATCAACTACAGGCCAGAAGCTAGACGTTCAACTGCAAGCACTAAAAGC
GAAAGGCTGCGCTAAGATTTACCAAGAGAAGCGCTCAGGTAAGACGGCAGACCGCCCAGAGCTAGAGAAGATGCTTGATT
ACGTGCGTGAAGGTGAAGCTATTGTTGTGACCAAGTTAGACCGTTTGGGTCGTTCTGTGGCTGACCTAGCGAATATCTCG
AAGTTACTCGATGACAAAGGCGTAGGACTCATTGTGATTGACCAAGGCATCGACACGACAACACCACACGGAAAGCTAAT
GTTCCACATGATTGCTGCTGTAGCTGAGTTCGAGTTGTCTCTACGTTACGAAAGACAGATGGAAGGTATTGCAGATGCAC
AGCGTAAAGGCGTTAAGTTTGGGCGTAAGAAGTCTGTAGACCGTGAGAGAGTCCACCAGCTACGAGAAGAAGGCTTGAGC
ATGGCTAAGATTGCTGAAGAATTAAGCTGTAGTAAGGGAGCGGTGCATAAGATAATCAGTGAGTTCATTAGTCAAAATAA
TAAACCGAGTAAATTCGAATTATAA

Protein sequence :
MTGQLIGYARVSTTGQKLDVQLQALKAKGCAKIYQEKRSGKTADRPELEKMLDYVREGEAIVVTKLDRLGRSVADLANIS
KLLDDKGVGLIVIDQGIDTTTPHGKLMFHMIAAVAEFELSLRYERQMEGIADAQRKGVKFGRKKSVDRERVHQLREEGLS
MAKIAEELSCSKGAVHKIISEFISQNNKPSKFEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR ACK44544.1 Tn2 resolvase Not tested SGI1 Protein 1e-26 42
tnpR AGK07036.1 Tn2 resolvase Not tested SGI1 Protein 1e-26 42
tnpR AGK07094.1 Tn2 resolvase Not tested SGI1 Protein 1e-26 42
tnpR ACF06167.1 resolvase Not tested Tn5036-like Protein 2e-26 42
ABTW07_3871 YP_005797119.1 resolvase IS26 Not tested AbaR4e Protein 3e-21 41
tnpR ACN81015.1 TnpR resolvase Not tested AbaR5 Protein 3e-21 41
1_318 CAJ77076.1 Resolvase Not tested AbaR1 Protein 2e-21 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AMBLS11_18020 YP_006826624.1 bacteriocin production protein GU371926.1.gene95.p0 Protein 2e-26 42