Gene Information

Name : AMBLS11_17380 (AMBLS11_17380)
Accession : YP_006826496.1
Strain : Alteromonas macleodii Black Sea 11
Genome accession: NC_018692
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4091129 - 4092514 bp
Length : 1386 bp
Strand : -
Note : COG0305 Replicative DNA helicase

DNA sequence :
GTGGCGTCTGCGTCTAAAAACGATAAAAATGTTGAGAAATTGAAGGTTCCACCTCATAGCATTGAGGCTGAGCAATCTGT
TTTAGGCAGCATGCTTATCGACCCCGAGAGCTGGGATAAGGTCGCGGAACTCGTCACCGATAATGATTTCTATAATCGCT
CACACCAAATAATCTTTCGCGCTATCACTCGACTACTAAACAGTAGCCAGCCAATCGACCTAATTACGGTATCAGAAGAG
CTGGAAAAGCATGATGAACTGGAAGATGCAGGTGGATTTGCCTACTTAGGTGAACTTGCCAAAAATACCCCAAGCTCCGC
GAACGTTGTGTCTTATGCGCAAATTATCAGCGAGCGTGCCATTACACGCGAACTTATCGGCGTAGCGCATGAAATCGCTG
AAGTAGGGTACAACCCTGAAGGCCGAGACAGTGCAGACATTCTTGATCTGGCAGAAAGTAAAGTATTCGAAATCGCCGAG
CGAAGAACTGGTGAAAACGAAGGTCCTCGCGATGTTGAGTCAATTCTAGGCAAGACTATCGACCGTCTAGAAGAATTGGT
GAAAACCAATAAAGAGGTGACCGGTGTTACAACGGGCTTCACCGATTTAGACAAGATGACCAGTGGTATGCAGCCTTCTG
ACCTTATCATTGTTGCGGCTCGTCCGTCGATGGGTAAAACGACCTTTGCCATGAACTTGATTGAAAACGCAATGATGGCA
GAAGACAAGCCTGTGCTCGTTTTTAGTCTTGAGATGCCTTCAGAACAAATCATGATGCGTATGCTGGCATCATTAAGCCG
CGTTGATCAAACCAAAATTCGTACCGCACAGCTCGACGATGAAGACTGGGCGCGAATATCCAACACCATGGCTATGCTTA
AAGACAAAGACAGCTTGTTTGTTGATGATTCATCAGGTTTGACGCCAATGGACGTGCGAAGCCGGGCACGTAAACTCGCT
CGCGAACGTGGCGGCATCAGCCTTATCATGGTCGATTACCTCCAGCTGATGCGTGTACCTTCTCTTAGCGACAACCGAAC
TTTGGAAATTGCTGAAATCTCACGGTCACTGAAAGCGCTGGCCAAGGAACTTGAAGTACCTGTAGTTGCTCTTTCTCAGC
TTAACCGTACGCTGGAACAACGTGCTGATAAGCGTCCAGTAAACTCCGACCTTCGTGAGTCTGGCTCAATCGAGCAGGAC
GCCGACCTTATCATGTTTATCTATCGTGATGAGGTGTATCACGAAAACAGTGAGTATAAGGGTATTGCAGAGATTATTAT
TGGTAAGCAGCGTAATGGTCCAATAGGTACCTGTCGACTAACCTTCCAAGGCCAGTTTTCACGATTTGATAACTACGCAG
GTCCAGCAATTGCGGACGAGTACTAA

Protein sequence :
MASASKNDKNVEKLKVPPHSIEAEQSVLGSMLIDPESWDKVAELVTDNDFYNRSHQIIFRAITRLLNSSQPIDLITVSEE
LEKHDELEDAGGFAYLGELAKNTPSSANVVSYAQIISERAITRELIGVAHEIAEVGYNPEGRDSADILDLAESKVFEIAE
RRTGENEGPRDVESILGKTIDRLEELVKTNKEVTGVTTGFTDLDKMTSGMQPSDLIIVAARPSMGKTTFAMNLIENAMMA
EDKPVLVFSLEMPSEQIMMRMLASLSRVDQTKIRTAQLDDEDWARISNTMAMLKDKDSLFVDDSSGLTPMDVRSRARKLA
RERGGISLIMVDYLQLMRVPSLSDNRTLEIAEISRSLKALAKELEVPVVALSQLNRTLEQRADKRPVNSDLRESGSIEQD
ADLIMFIYRDEVYHENSEYKGIAEIIIGKQRNGPIGTCRLTFQGQFSRFDNYAGPAIADEY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 4e-102 51
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 1e-106 50
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 1e-102 50
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 7e-107 50
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 2e-104 50
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 3e-95 48
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 3e-95 48
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 3e-87 46
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 1e-81 44