Gene Information

Name : glnA (AMBLS11_14840)
Accession : YP_006825992.1
Strain : Alteromonas macleodii Black Sea 11
Genome accession: NC_018692
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.3.1.2
Position : 3475347 - 3476756 bp
Length : 1410 bp
Strand : +
Note : COG0174 Glutamine synthetase

DNA sequence :
ATGTCAGTAGAAAAGGCATTAGAGCTGATTAAAGAAAGTGAAGCGAAGTTTGTAGATTTACGTTTTACCGATACAAAAGG
TAAAGAACAACACGTATCTATCCCTGCGGGCCTAGTTGATGAAGAGTTTTTCGAAGAAGGTAAAATGTTCGACGGTTCTT
CAATCGCTGGCTGGAAAGGTATTAACGAATCAGACATGGTTCTTCTTCCAGATGCTGACAGCTGTGTTGTTGACCCTTTC
GCAGAAGAGACACAAGTAAACATTCGTTGTGACATCGTTGAGCCTTCAACAATGGAAGGTTATGAGCGTGACCCACGTTC
AGTTGCTCGCCGCGCAGAAGAATTCCTAAAATCAACTGGCATCGGTGACACTGTATTCTTTGGTCCAGAGCCAGAGTTCT
TCCTATTCGACGACGTTAAATTCCATACTGACATGGCGGGTTCTTTCTACAAGATCGACTCTTCTGAAGCCAAGTGGAAC
TCAGGTGAAGAATTTGAAGGCGGTAACATGGCGCACCGTCCTGGCGTTAAAGGCGGTTACTTCCCAGTACCTCCAGTAGA
TTCTGCACACGATATCCGTGCTGCAATGTGCTTAGTTATGGAAGAAATGGGCCTTGTAATTGAAGCGCACCACCACGAAG
TAGCAACTGCTGGCCAAAACGAAATTGCTTGCCAATTCAACACGCTAGTTAAGAAAGCTGACGAAATCCAAATTTACAAG
TATGTAGTTCACAACGTTGCTCACGCATACGGTCAAACTGCTACCTTTATGCCTAAGCCTCTAGTTGGCGACAACGGCTC
TGGTATGCACTGCCACCAGTCTATCTCTAAAGATGGCGTAAACATCTTCGCGGGTGACAAGTACGCGGGTCTTTCTGAAG
AAGCACTATACTACATCGGCGGTATCATCAAGCACGCGCGTGCAATTAACGCCTTTGCTAACGCTTCTACTAACTCATAC
AAGCGTCTAGTTCCTGGATTCGAAGCACCGGTAATGCTTGCATACTCTGCGCGTAACCGTTCAGCATCTATTCGTATTCC
TCACGTAACTAGCGATAAAGCACGTCGTATCGAAGTACGTTTCCCTGACCCTACAGCTAACCCATACCTAGCGTTCACCG
CTATGCTTATGGCGGGTATCGACGGTATTAAGAACAAGATCCACCCTGGCGATTCAATGGATAAAGACTTGTACGACCTA
CCGCCAGAAGAAGCTGCTGAAATCCCAACAGTTGCAAGCTCGCTAGAAATGGCGCTTGAAGCTCTAGATAACGACCGTGA
CTTCCTTAAAGCTGGTGGCGTTATGACTGACGACATGATTGATGCATACATCGATCTTAAGTCTGAAGAAGTAACGAAAC
TTAACATGACTACTCACCCAGTTGAGTTCGACATGTACTACAGCGTGTAA

Protein sequence :
MSVEKALELIKESEAKFVDLRFTDTKGKEQHVSIPAGLVDEEFFEEGKMFDGSSIAGWKGINESDMVLLPDADSCVVDPF
AEETQVNIRCDIVEPSTMEGYERDPRSVARRAEEFLKSTGIGDTVFFGPEPEFFLFDDVKFHTDMAGSFYKIDSSEAKWN
SGEEFEGGNMAHRPGVKGGYFPVPPVDSAHDIRAAMCLVMEEMGLVIEAHHHEVATAGQNEIACQFNTLVKKADEIQIYK
YVVHNVAHAYGQTATFMPKPLVGDNGSGMHCHQSISKDGVNIFAGDKYAGLSEEALYYIGGIIKHARAINAFANASTNSY
KRLVPGFEAPVMLAYSARNRSASIRIPHVTSDKARRIEVRFPDPTANPYLAFTAMLMAGIDGIKNKIHPGDSMDKDLYDL
PPEEAAEIPTVASSLEMALEALDNDRDFLKAGGVMTDDMIDAYIDLKSEEVTKLNMTTHPVEFDMYYSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 5e-106 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_006825992.1 glutamine synthetase VFG1399 Protein 1e-115 50