Gene Information

Name : AMBLS11_14415 (AMBLS11_14415)
Accession : YP_006825907.1
Strain : Alteromonas macleodii Black Sea 11
Genome accession: NC_018692
Putative virulence/resistance : Virulence
Product : response regulator consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3383425 - 3384105 bp
Length : 681 bp
Strand : +
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence :

ATGAAAGTGCTACTTGTAGAAGATGATCCTAAGGTTGCCTCGCACATTGCAAACGGACTATTGGGTGAAGGGCATGAATG
TATTACTGTAGGTGACGGAGCATCAGGCTACCACCAAGCATCAAATAACGATTTAGATGCGGTGATATTAGATGTAATGC
TTCCTGAGCTTGACGGCTTTTCGGTGTTGGAAAAACTTCGCGAAGAAGGAAATACAACGCCTGTTTTGTTGTTAAGCGCA
AAAAGCCAAGTTGAAGATAAAGTTAAAGGCCTGCGTACAGGGGCAAATGACTATCTCACAAAGCCTTTTGCCTTTGAAGA
ACTGCTTGCCCGCGTTGAAGGCCTTGCAGGTCGTAATAAAGAAGGCGAAGACAAGACGCTGATAAAAGTCGGCGACCTTA
CGCTAGATTTGGTCAACCGCAAAGTTCTGCGTGGTGACCAAGAGATTGATTTACAGTCTAAGGAATTTCAATTACTAGAA
TGTTTGCTTCGTCATAAAGGCAAAGTTGTGACGCGAAGTATGCTGCTTGAGCAAGTTTGGAATTATCATTTCGACCCCCA
AACTAATGTGATTGATGTTCATATTAGCCGTTTGCGTCAGAAAGTGGATAAAGCGTTTAACGTCCCGCTTATAGAGACTG
TGCGAGGCACAGGTTATCGAATAGCGGATGGGCTTGCATGA

Protein sequence :

MKVLLVEDDPKVASHIANGLLGEGHECITVGDGASGYHQASNNDLDAVILDVMLPELDGFSVLEKLREEGNTTPVLLLSA
KSQVEDKVKGLRTGANDYLTKPFAFEELLARVEGLAGRNKEGEDKTLIKVGDLTLDLVNRKVLRGDQEIDLQSKEFQLLE
CLLRHKGKVVTRSMLLEQVWNYHFDPQTNVIDVHISRLRQKVDKAFNVPLIETVRGTGYRIADGLA

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
copR	NP_460069.2	transcriptional regulatory protein YedW	Not tested	SPI-5	Protein	2e-37	43
copR	AAC33719.1	regulatory protein CopR	Not tested	SPI-5	Protein	1e-36	43

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
AMBLS11_14415	YP_006825907.1	response regulator consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein	BAC0111	Protein	2e-49	48
AMBLS11_14415	YP_006825907.1	response regulator consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein	BAC0308	Protein	2e-46	48
AMBLS11_14415	YP_006825907.1	response regulator consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein	BAC0083	Protein	2e-47	47
AMBLS11_14415	YP_006825907.1	response regulator consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein	BAC0347	Protein	2e-46	47
AMBLS11_14415	YP_006825907.1	response regulator consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein	BAC0638	Protein	4e-44	47
AMBLS11_14415	YP_006825907.1	response regulator consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein	BAC0197	Protein	1e-46	46
AMBLS11_14415	YP_006825907.1	response regulator consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein	BAC0125	Protein	2e-45	45
AMBLS11_14415	YP_006825907.1	response regulator consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein	AE016830.1.gene1681.	Protein	1e-39	41

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
AMBLS11_14415	YP_006825907.1	response regulator consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein	VFG0596	Protein	6e-38	43
AMBLS11_14415	YP_006825907.1	response regulator consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein	VFG1389	Protein	4e-35	43
AMBLS11_14415	YP_006825907.1	response regulator consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein	VFG1390	Protein	2e-38	41