Gene Information

Name : AMBLS11_12195 (AMBLS11_12195)
Accession : YP_006825467.1
Strain : Alteromonas macleodii Black Sea 11
Genome accession: NC_018692
Putative virulence/resistance : Unknown
Product : Riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2872227 - 2873366 bp
Length : 1140 bp
Strand : -
Note : COG0117 Pyrimidine deaminase

DNA sequence :
GTGAACCACGATACGGTTAAAAATGATTATTTCTGGATGGCAAAAGCCATTCAACTTGCCCAACAAGGGCGCTTTACCAC
TTCTCCTAACCCTCGTGTTGGCTGCGTAATTGTTGACGAAAACAATCAATTACTTGGTCAGGGGTATCACATTCAAGCTG
GCACACCCCATGCCGAAGTTCACGCATTAAGACAAGCATCTAACGCACGACCACATGGTGCAAAAGGCGCGACGGCTTAC
GTTACGCTTGAACCTTGTAGTCATTTTGGACGCACACCGCCATGTGCCAAAGCGCTCGTGGAGGCTGAAGTAGCACGAGT
GGTTATAGCCATGACTGACCCGAACCCTAACGTCTGTGGTAACGGTATCAGCTTACTGCAAGATGCAGGTATTGAAGTCG
TTAGCGATGTGATGGCGGCAGAGTCCGCGGCGCTAAACCCCGGGTTTATTAAACGAATGCTTACTGGTAAACCCTTTGTT
CGCGTAAAGTTGGGCATTAGCCTAGATGGAAAAATAGCCCTTCAAAATGGAGTGAGTCAGTGGATTACTGGTGCGGAGGC
AAGACGGGATGTGCAACAGTATCGAGCCCAAAGTTGCGTAGTATTGACGGGGTCGGGTACGGTACAAGCTGATAATCCTA
GTCTCTTAGTTCGTGAAAAAGAGGCTCAGTTTGAAAACTATCCGCTAGATCATATCCGCCAGCCAGCCCGTGTGGTTGTA
GATAGCAAAAGTAGGCTTAGAAGAGACTACACACTTTTTAACGACGGCAATATCACGTTCACGGCGACGTCACAGGCTCA
CCCAGACACCGCTACTCAGCACTATCTCCAATTGGACGAAAAGGACGGTAAGCTCGACTTACATGCGCTAATGTCAGCAT
TGGGTGATAAGCAATACAATGAAGTCTGGGTAGAAGCAGGCCCAGGCCTTGCTGGTGCATTATTGCAAGAAGGGCTGGTG
GATGAACTTATTTGCTACCAGGCGCCTAAGCTTTTAGGTGATAAGGGAGTAAGTATGGTTAATTTACCCGCGTTCACGTC
GCTAAATGAATGTATTTCGCTTTCGCTTATTGAAAATCGTCAGGTGGGTAACGATATTAAGCTTATCTTCCGTCCTGATG
TTAGCAACACCCGTGGTTAA

Protein sequence :
MNHDTVKNDYFWMAKAIQLAQQGRFTTSPNPRVGCVIVDENNQLLGQGYHIQAGTPHAEVHALRQASNARPHGAKGATAY
VTLEPCSHFGRTPPCAKALVEAEVARVVIAMTDPNPNVCGNGISLLQDAGIEVVSDVMAAESAALNPGFIKRMLTGKPFV
RVKLGISLDGKIALQNGVSQWITGAEARRDVQQYRAQSCVVLTGSGTVQADNPSLLVREKEAQFENYPLDHIRQPARVVV
DSKSRLRRDYTLFNDGNITFTATSQAHPDTATQHYLQLDEKDGKLDLHALMSALGDKQYNEVWVEAGPGLAGALLQEGLV
DELICYQAPKLLGDKGVSMVNLPAFTSLNECISLSLIENRQVGNDIKLIFRPDVSNTRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 4e-62 45
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 4e-62 45