Gene Information

Name : AMBLS11_09600 (AMBLS11_09600)
Accession : YP_006824952.1
Strain : Alteromonas macleodii Black Sea 11
Genome accession: NC_018692
Putative virulence/resistance : Virulence
Product : peroxiredoxin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2278174 - 2278671 bp
Length : 498 bp
Strand : -
Note : COG2077 Peroxiredoxin

DNA sequence : 
ATGGCATCAGTTACTTTTCAAGGCAATACAGTTACGACAAAGGGTCAGCTTCCTGAAGTGGGTACTTCTGCACCAGACTT
TACATTAGTAAAAGCAGATTTGGGTGAAGTAACGCTGTCTGAGCTTGCAGGAAAAAATGTCGTGTTGAATATTTTCCCTT
CTATTGACACCGGAACGTGCGCGATGTCAGTGCGCAAATTCAACGAAGAAGCGGCAAAATTGGATAACACTACAGTTATC
TGTGTATCGGCAGATCTTCCGTTTGCAGCGGGTCGCTTTTGTGGTGCTGAAGGTATTGAAAACGTGCTTACAGGCTCTAC
TTTCCGCTCAAGCTTCGGCGACGACTATGGTGTTACGTTTGAATCTGCGCCGCTTACCGGGCTTCTATCTCGTTCTGTAG
TTGTCATCGATACCGAAGGCAAAGTGGTTTACACAGAGCAAGTAGCAGAAACAACAGAAGAGCCGAACTACGACGCAGCT
ATTGCTGCGTTGAAATAA

Protein sequence : 
MASVTFQGNTVTTKGQLPEVGTSAPDFTLVKADLGEVTLSELAGKNVVLNIFPSIDTGTCAMSVRKFNEEAAKLDNTTVI
CVSADLPFAAGRFCGAEGIENVLTGSTFRSSFGDDYGVTFESAPLTGLLSRSVVVIDTEGKVVYTEQVAETTEEPNYDAA
IAALK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 2e-30 42
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 7e-31 42
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 1e-30 42
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 5e-31 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AMBLS11_09600 YP_006824952.1 peroxiredoxin VFG0087 Protein 2e-31 42