Gene Information

Name : smpB (AMBLS11_08250)
Accession : YP_006824686.1
Strain : Alteromonas macleodii Black Sea 11
Genome accession: NC_018692
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1959780 - 1960259 bp
Length : 480 bp
Strand : -
Note : COG0691 tmRNA-binding protein

DNA sequence :
ATGAAAAAGAATAAAGCCAACAAAAACACCTCAGGAAATATCGCGCAGAACAAAAAAGCGCGTCATGACTATTTCCTAGA
AGACAAGTTCGAAGCTGGACTTGAGCTTCAAGGGTGGGAAATTAAAAGTATTCGTGCCGGTAAAGTGAACATTACCGATG
CGTACGTTATTATCCAAAATGCCGAAGCGTATTTGGTAGGTTGTAGAATTAGTCCGCTAAATCAAGCATCTACCCATGTA
ATCGCTGCGCCTGAGCGTGCGCGCAAATTGTTGCTAAACAAACGCGAAATAGACCGCTTAATGGGTGCTCGAGACCGCCA
AGGTTACTCTATCGTTGCCACTTCAATGTATTGGAAAAAGTGTTGGGTGAAACTAGAGATTCATCTAGCCAAAGGTAAGC
ACGCGCACGATAAGCGTGACACCATTAAAGATAAAGATTGGCAGCGCCAAAAAGAGAGAATGATGAAACACAGCGTTTAA

Protein sequence :
MKKNKANKNTSGNIAQNKKARHDYFLEDKFEAGLELQGWEIKSIRAGKVNITDAYVIIQNAEAYLVGCRISPLNQASTHV
IAAPERARKLLLNKREIDRLMGARDRQGYSIVATSMYWKKCWVKLEIHLAKGKHAHDKRDTIKDKDWQRQKERMMKHSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 4e-45 57
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 4e-22 47