Gene Information

Name : AMBLS11_00495 (AMBLS11_00495)
Accession : YP_006823148.1
Strain : Alteromonas macleodii Black Sea 11
Genome accession: NC_018692
Putative virulence/resistance : Unknown
Product : phosphomethylpyrimidine synthase ThiC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 122664 - 124574 bp
Length : 1911 bp
Strand : -
Note : COG0422 Thiamine biosynthesis protein ThiC

DNA sequence :
ATGTCGAACAGACGCGAACAGCGCCAACAAGCACAACAATTCATTAATGAACTTGCGGGCGAAGCTTATCCAAATTCTTC
TCGCCACTACGAATGTGGCAGCCGTGACGATATACGTGTGGCCATGCGCCTTATTTACCAACACGACAGTTTAGTGGGTG
GTACCGAAGACAACCCTATTTTAGAGCCCAACCCGCCAATTCCGGTTTATGACACTTCAGGCCCCTATGGCGACCCGTCA
GAAAATATCGACGTTCATAAAGGCTTAAGCCCGCTTCGACAAAAGTGGATTGAGGAGCGTAACGATACCCTTGAATTGGA
GGGCGTTTCCTCAAGCTTTGCAAAAGAACGTGAAAACGACATATTTACCGAAGATTTCCGCTTTATTCGCAGCCGCAAAC
CACTAAAAGCAAAAGCAGGCAGAAACGTTACCCAGCTTCACTACGCAAGACAGGGCATTATTACCCCTGAAATGGAATAC
ATTGCCATTCGCGAGAATATGGGTCGCCAAGCCATTAAAGATGCCGAACTGACGCAGCAGCACAAAGGCGAACACTTTGG
CGCGAATTTACCCGACACCATTACGCCTGAATTTGTACGTCAGGAAGTGGCTGCAGGCCGTGCCATTATTCCATGTAACA
TCAATCACCCTGAACTAGAGCCAATGATTATTGGGCGTAATTTCTTAGTGAAAATTAACGCGAATATTGGTAACTCGGCC
GTTACTTCATCTATTGAAGAAGAGGTAGAAAAGCTGGTGTGGTCAACGCGCTGGGGCGCCGATACCATCATGGATCTATC
TACCGGAAGAAACATTCACGAAACACGCGAATGGTTGCTGAGAAATAGCCCTGTTCCCCTGGGCACTGTCCCCATCTATC
AAGCGCTAGAAAAAGTAAACGGTGTAGCCGAAGACTTAACGTGGGAAATGTTTAAAGACACCCTAATTGAGCAAGCCGAG
CAAGGTGTAGACTACTTCACCATTCACGCTGGCGTGCTGCTTGAATACGTACACCTTACCGCAAAGCGGGTTACCGGCAT
TGTATCGCGCGGCGGCTCGATAATGGCAAAGTGGTGCTTAAGCCACCACCAGCAAAGCTTTCTGTATGAGCACTTTCACG
ATATTTGCGAAATTTGCGCTAAGTACGATGTAGCGTTGTCGCTAGGTGATGGCCTGCGCCCTGGCAGCATGGCTGACGCT
AATGACGATGCGCAGTTCTCTGAATTACGTACCCTTGGTGAGTTGACGAAAATTGCATGGGAATACGATGTTCAGGTAAT
GATTGAAGGCCCAGGGCATGTGCCAATGCACATGATTAAACAAAACATGGAAGAGCAGCTTAAACACTGTCACGAAGCGC
CGTTTTATACCCTTGGCCCTCTCACCACTGACATCGCACCTGGCTACGATCACTTCACATCAGGTATAGGTGCCGCCATG
ATTGGATGGTATGGCTGCGCAATGCTGTGCTACGTAACGCCCAAAGAACATTTAGGCTTACCTAACAAAGAAGACGTCAA
GCAAGGGTTGATCACTTACAAAATTGCGGCTCACGCTGCCGACTTGGCGAAAGGACACCCAGGAGCACAAATTCGCGACA
ACGCCATGTCGAAAGCTCGCTTTGAATTCAGATGGGAAGACCAGTTCAATTTAGCTCTCGACCCGCATACTGCGCGCGCT
TATCACGATGAAACCTTGCCGCAGGCGTCTGGTAAAGTTGCGCATTTCTGCTCTATGTGCGGCCCTAAATTTTGCAGTAT
GAAAATTTCTCAGGAAGTGCGCGATGTGGCTAAACAAGCGCAGCAGCAAGAGTTTGAGAAAGAAAAAGGCATGAAAGACA
TGGCCGATGCATTTAACCAGTCGGGCGCTCAGCTTTACCACACAGCAGATAGCAAGGTAGAGCTACCATGA

Protein sequence :
MSNRREQRQQAQQFINELAGEAYPNSSRHYECGSRDDIRVAMRLIYQHDSLVGGTEDNPILEPNPPIPVYDTSGPYGDPS
ENIDVHKGLSPLRQKWIEERNDTLELEGVSSSFAKERENDIFTEDFRFIRSRKPLKAKAGRNVTQLHYARQGIITPEMEY
IAIRENMGRQAIKDAELTQQHKGEHFGANLPDTITPEFVRQEVAAGRAIIPCNINHPELEPMIIGRNFLVKINANIGNSA
VTSSIEEEVEKLVWSTRWGADTIMDLSTGRNIHETREWLLRNSPVPLGTVPIYQALEKVNGVAEDLTWEMFKDTLIEQAE
QGVDYFTIHAGVLLEYVHLTAKRVTGIVSRGGSIMAKWCLSHHQQSFLYEHFHDICEICAKYDVALSLGDGLRPGSMADA
NDDAQFSELRTLGELTKIAWEYDVQVMIEGPGHVPMHMIKQNMEEQLKHCHEAPFYTLGPLTTDIAPGYDHFTSGIGAAM
IGWYGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAMSKARFEFRWEDQFNLALDPHTARA
YHDETLPQASGKVAHFCSMCGPKFCSMKISQEVRDVAKQAQQQEFEKEKGMKDMADAFNQSGAQLYHTADSKVELP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 72
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 72
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 69