Gene Information

Name : ribD (B5T_00818)
Accession : YP_006819445.1
Strain : Alcanivorax dieselolei B5
Genome accession: NC_018691
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 870078 - 871193 bp
Length : 1116 bp
Strand : +
Note : -

DNA sequence :
ATGAGCGATCCGGCTTTTGATCAGCATTGCATGATCCGAGCCCTGCAGTTGGCCCGACAAGGACTTTATACCACCGACCC
CAACCCGCGCGTGGGCTGTGTACTGGCCAAGGGCGGGCAAATCATCGCCGAGGGCTTCCACGCCCGTGCCGGTGAACCTC
ACGCCGAACGTCACGCCCTTACCACCGCCGGTGCCGAAGCGCGCGGCGCCACCGCCTATGTCACCCTGGAACCCTGTTCC
CACACTGGCCGCACCGGTCCCTGCGCCGACGCCTTGATCAAGGCTGGCGTGGCCCGGGTGGTGGCGGCCATGGAGGACCC
GAACCCGCAAGTGGCCGGCAATGGTTTTGGCAAGCTGCGTGCCGCCGGCATTCAGGTGGAGGTTGGTCTGCAAGAGAGTG
AAGCCCGGGCGCTTAACCCCGGCTTTATCCGTCGCATGCGCGGTGAACGGCCCTGGGTGCGGATCAAGGTGGCCGCCAGT
GTGGACGGCCGCACCGCCATGGCCAGCGGCGAATCCCAGTGGATCACCGGCCCGCAGGCCCGCGAGGATGTGCAGCGGCT
GCGCGCGCGCAGCTCGGCGGTGATCACCGGTATCGGCACGGTGCTGGCGGACCGGCCTTCCTACACCGTGCGCGCGGATC
AGTGGCGGCTGGGTGAGTACGGCTCCGATCAGGTACGCCAACCCTTGCGGGTGATCCTCGACCGGCGCCTGCGCACGCCG
GTGGACGTGCCGGTGGTCACCACCGCCGGGCCCTGCCTGGTCGTCGGTGGGGAGGCCCATCCCGAACGGCAGCGTGCCCT
GGAAGCGGCCGGCGCGGAAGTCATGCACCTGCCCAGCTCCGGCTCCGGCGTGGACCTGAAAGCGCTGCTGGCGGACCTGA
GCAGGCGGGAATGCAACGAAATCCTGGTGGAATGCGGCGCCACCCTGGCCGGGGCCTTCGTCCGCGAAGCGCTGTTCGAC
GAATTGATTGTCTACATGGCACCGGCGCTGCTCGGCACCGACGCCCGTGGCCTGCTCTCCTTGCCGCTGGTACGCATGGC
GGAAAAAGTATCCCTGCGCTGGGCGGATGTGCGGCAACTGGGCAACGATCTGCGGCTGACGCTGGTGCCAGAATAG

Protein sequence :
MSDPAFDQHCMIRALQLARQGLYTTDPNPRVGCVLAKGGQIIAEGFHARAGEPHAERHALTTAGAEARGATAYVTLEPCS
HTGRTGPCADALIKAGVARVVAAMEDPNPQVAGNGFGKLRAAGIQVEVGLQESEARALNPGFIRRMRGERPWVRIKVAAS
VDGRTAMASGESQWITGPQAREDVQRLRARSSAVITGIGTVLADRPSYTVRADQWRLGEYGSDQVRQPLRVILDRRLRTP
VDVPVVTTAGPCLVVGGEAHPERQRALEAAGAEVMHLPSSGSGVDLKALLADLSRRECNEILVECGATLAGAFVREALFD
ELIVYMAPALLGTDARGLLSLPLVRMAEKVSLRWADVRQLGNDLRLTLVPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-65 51
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-65 51