Gene Information

Name : kpsF (B5T_03572)
Accession : YP_006822181.1
Strain : Alcanivorax dieselolei B5
Genome accession: NC_018691
Putative virulence/resistance : Virulence
Product : sugar isomerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3970371 - 3971339 bp
Length : 969 bp
Strand : +
Note : -

DNA sequence :
ATGCCTTACAACTTCATCGCCACCGCGCGCCGTGTACTGGACGAGGAAGCCCAGGCGGTGGCCGCGCTCAGTGCGCGTGT
GGATAAGGATTTCGAAAACGCCTGCGAGCGCCTGCTGGCCTGCACCGGTCGCATCATCGTCACCGGCATGGGCAAAAGCG
GCCACATCGGCACCAAGCTGGCGGCCACTCTGGCCAGCACTGGCAGCCCGTCGTTCTTCGTCCATCCGGGGGAAGCCTCC
CACGGTGATCTGGGCATGATCACCAGCGAGGACGTGGTGCTGGCGCTGTCCAATTCCGGCGAGACTCAGGAAATACTGAC
CATCATCCCGGTGATCAAACGCAAAGGCAGTGGGCTGATCAGCATGACCGGCCGCCCGGAATCTTCCCTGGCGCAATTAT
CCGATGTTCATCTGAACGTGGCGGTGAAGGAAGAAGCCTGCCCGCACAATCTGGCCCCCACCTCTTCCACCACCGCCGCC
CTGGCCATGGGCGATGCCCTGGCCATAGCGCTGCTGGAAGCGCGCGGTTTCACCCCGGAGGATTTCGCCCTCAGCCATCC
CGGCGGCAGCCTGGGACGCCGGTTGCTGCTCAAAGTGGACGATGTCATGCACGGAGAGGAACAACTGCCAGTGGTCAGCG
CCAGCACCCCCTTATCCGATGCTCTGCTGGAAATGACCCGCAAGGGCCTGGGCATGACCACGGTGGTGGACGAGGACGGC
AAGCTGATCGGCATCTTCACCGACGGTGATCTGCGCCGCACCCTGGAGAAAGGCGTCGATGTCCGTGTCGTCGGCATTCG
CGATGTGATGTCACCGCGCCCGGTCACCATCCAGCCCGGCCGTCTGGCGGCGGAGGCATTGCAACTGATGGAGACGCGCA
AGGTGAACGGTCTGATCATCTGTGACGACCAGCAGCGCCCGATCGGTGCGCTCAACACCCAGGATCTGCTGCGCGCGGGG
GTAATGTAA

Protein sequence :
MPYNFIATARRVLDEEAQAVAALSARVDKDFENACERLLACTGRIIVTGMGKSGHIGTKLAATLASTGSPSFFVHPGEAS
HGDLGMITSEDVVLALSNSGETQEILTIIPVIKRKGSGLISMTGRPESSLAQLSDVHLNVAVKEEACPHNLAPTSSTTAA
LAMGDALAIALLEARGFTPEDFALSHPGGSLGRRLLLKVDDVMHGEEQLPVVSASTPLSDALLEMTRKGLGMTTVVDEDG
KLIGIFTDGDLRRTLEKGVDVRVVGIRDVMSPRPVTIQPGRLAAEALQLMETRKVNGLIICDDQQRPIGALNTQDLLRAG
VM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 1e-49 44
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 2e-49 44
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 3e-49 44