Gene Information

Name : B5T_00353 (B5T_00353)
Accession : YP_006818983.1
Strain : Alcanivorax dieselolei B5
Genome accession: NC_018691
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 372900 - 373691 bp
Length : 792 bp
Strand : -
Note : -

DNA sequence :
TTGCGTAGCGGCCGGGCCAAGCGGGATGAGCAACTGGTTCCGCACATCGAGCGTGTCTGGGATACCAATCTGCGGGTCTA
TGGCGCCGATAAGGTCTGGAAGCAGATGAACCGGGAAGCCATTCCGGTGGCGCGCTGCACGGTGGAGCGGCTCATGCGCC
GCCTGGGCTTGCGAGGCGCCGGCCGTGGCAAGACGGTGCGCACCACCGTTGCGGATCGGTCGCTGCCGTGTCCGCTGGAT
CGGGTCAACCGCCAGTTCACCGCGGATCGCCCCAATCAGCTCTGGGTCTCGGACTTTACCTACGTCTCCACCTGGCAGGG
CTGGTTGTATGTGGCCTTCGTTATCGATGTTTTCGCGCGATGTATCGTGGGCTGGCGCGTTAGCCGCACCATGACCACTG
ACTTCGTACTCGACGCATTGGAGCAGGCGCTTTACGCCCGCCGGCCCAGTGACTCGGAGAACTTGATTCACCACTCCGAC
AGAGGCGCGCAATATGTGTCGGTGCGCTACACGGAACGTCTGGTCGAGGCGGGCATCGACCCGTCGGTGGGCAGCAAGGG
CGACAGCTACGATAACGCCCTGGCCGAGACCATCAACGGGCTTTACAAGGCTGAGGTAATCCATCGGCGCGGCCCCTGGA
AATCCATGGAATCCGTGGAACTGGCCACGCTGGAGTGGGTGTCCTGGTTCAACCATCAGCGACTGATGGGGCCACTGGGA
TATATCCCGCCGGCGGAAGCTGAGGCAAACTACTACAGGCAACTCAATAGTCAGGCCGCCATCGCAGCCTGA

Protein sequence :
MRSGRAKRDEQLVPHIERVWDTNLRVYGADKVWKQMNREAIPVARCTVERLMRRLGLRGAGRGKTVRTTVADRSLPCPLD
RVNRQFTADRPNQLWVSDFTYVSTWQGWLYVAFVIDVFARCIVGWRVSRTMTTDFVLDALEQALYARRPSDSENLIHHSD
RGAQYVSVRYTERLVEAGIDPSVGSKGDSYDNALAETINGLYKAEVIHRRGPWKSMESVELATLEWVSWFNHQRLMGPLG
YIPPAEAEANYYRQLNSQAAIAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 1e-58 66
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 9e-58 65
tnpC AAD44736.1 TnpC Not tested SHI-2 Protein 6e-57 65
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 2e-65 64
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 9e-66 64
Z1198 NP_286733.1 transposase Not tested TAI Protein 3e-68 64
Z1638 NP_287141.1 transposase Not tested TAI Protein 3e-68 64
Z1221 NP_286756.1 transposase Not tested TAI Protein 1e-68 64
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 1e-68 64
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 4e-67 64
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 3e-67 64
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 1e-67 64
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 1e-67 64
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 1e-67 64
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 6e-65 63
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 2e-65 63
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 2e-65 63
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 2e-65 63
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 7e-67 63
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 4e-67 63
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 1e-43 63
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 3e-64 62
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 7e-44 49
CDCE8392_1774 YP_005134308.1 transposase-like protein Not tested Not named Protein 2e-26 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B5T_00353 YP_006818983.1 integrase catalytic subunit VFG1602 Protein 1e-64 62