Gene Information

Name : murD (B5T_03490)
Accession : YP_006822100.1
Strain : Alcanivorax dieselolei B5
Genome accession: NC_018691
Putative virulence/resistance : Unknown
Product : UDP-N-acetylmuramoylalanine--D-glutamate ligase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3886404 - 3887729 bp
Length : 1326 bp
Strand : -
Note : -

DNA sequence :
ATGACGAAGGACGCGTTTGATCTGGTCATTGGCCTGGGTGTTTCCGGCCGCTCCGTGCTCCGCTATTTGCAGGGGCAGGG
TATGGCCGTGCGCGCTCTCGACACCCGTCAGGCTCTGGCGGGCCTGGATGACCTGCACGCGGAATTCCCCAAATTGAAGG
TGCATACCGGCGGCTTCAAGAAAGGCTGGATGGAACGGGCCCGCCGTCTGATCGTCAGCCCCGGCGTGGCGATTTCCACC
CCGGCCATCGCCGCGCAGATCGCGGAAGGCAAGGAAGTGATCGGCGACATCGAGCTGTTCGCCCGCGCCGCCAGCCGCCC
GCTGGTGGCGATCACCGGTTCCAATGCCAAGAGCACCGTCACCACCCTGCTCGGTGAGGTGGCCGAAGCCTGCGGTCGTC
AGCCGGGGGTTGGCGGCAACCTGGGAATCCCGGCGCTGGATCTGTTGGCCAGCGACGCCGGTCTGTACGTCCTGGAGCTG
TCCAGCTTCCAGCTGGAGACGACCTACAGCCTGAATGCCCAGGTGGCCACTATTCTCAACGTGTCCCAGGACCATCTGGA
CCGCTACAACCGTTTCAGCGACTACCTGGCCGCCAAGCAGCGCATCTACGACGGCTGCCAGGTGGCGGTATGGAATCGCG
ATGACGTGGCCACCCGTCCTCAGGTGCCGGTGCCACGGGAAGTGACCTTCGGCAGCCACCCGCAAGCGGACTATCGGCTC
GACAGCGATCGCAACGCTCTGCTCTACAAGGGCGAAACCCTGTTGACGCTGGACCAGCTGACGCTCACCGGCCATCACAA
CGCCATGAACGTGCTGGCGGTGCTGGCCATGGCCGACGCCCTGGGGTTGGAACGGGAGACCGCGCTGGCCACGGTCTGTG
CGTTCCAGGGCTTGCCCCATCGCTGCCAGATGGTGGCGGAAGCCGGCGACGTGCGCTGGTTCAACGATTCCAAGGCCACC
AATGTGGGCGCCACGCTGGCGGCACTGACCGGCATTGGCGAGGCCATCAATGGCAAGGTGATTCTGATCGCCGGCGGTCA
GGGCAAGGGGCAGGATTTCTCTCCGCTGGCGGAGCCGGCCCGGCAATACCTGCGCGCGGCGCTGCTGCTCGGTGAAGACG
CGGACAAGGTGGCGGACGGTCTGATCGGCGTGCCGCGTGAACGGGCGGAGACCATGGCCGAGGCGGTGACGCGGGCGCGG
CAACTGGCCCAGCCCGGTGACGCGGTGTTGCTGTCGCCGGCTTGCGCGTCCTTCGACATGTACAGCGGCTACACCGAACG
CGGCGATGATTTCGCCCATCATGCCCGGGAGGTGAGCCATGGCTAG

Protein sequence :
MTKDAFDLVIGLGVSGRSVLRYLQGQGMAVRALDTRQALAGLDDLHAEFPKLKVHTGGFKKGWMERARRLIVSPGVAIST
PAIAAQIAEGKEVIGDIELFARAASRPLVAITGSNAKSTVTTLLGEVAEACGRQPGVGGNLGIPALDLLASDAGLYVLEL
SSFQLETTYSLNAQVATILNVSQDHLDRYNRFSDYLAAKQRIYDGCQVAVWNRDDVATRPQVPVPREVTFGSHPQADYRL
DSDRNALLYKGETLLTLDQLTLTGHHNAMNVLAVLAMADALGLERETALATVCAFQGLPHRCQMVAEAGDVRWFNDSKAT
NVGATLAALTGIGEAINGKVILIAGGQGKGQDFSPLAEPARQYLRAALLLGEDADKVADGLIGVPRERAETMAEAVTRAR
QLAQPGDAVLLSPACASFDMYSGYTERGDDFAHHAREVSHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00311 YP_008207776.1 UDP-N-acetylmuramoylalanine-D-glutamate ligase Not tested AbaR25 Protein 1e-75 47
BJAB0868_00315 YP_008211641.1 UDP-N-acetylmuramoylalanine-D-glutamate ligase Not tested AbaR26 Protein 1e-75 47