Gene Information

Name : fliP (B5T_03423)
Accession : YP_006822033.1
Strain : Alcanivorax dieselolei B5
Genome accession: NC_018691
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3816354 - 3817112 bp
Length : 759 bp
Strand : +
Note : -

DNA sequence : 
GTGAAGCGCGGCCCGCGCTGGCGGTTGTTGGCGGCTCTTTTACTGCCCGCTCTGATGCTGCCCGGTCTGGCCTGGGCTCA
GGCCAGCATCCCCGGCCTCACCAGCCAGCCCACCGCCGACGGCGGCCAACAATGGTCGATCCAACTGCAGACGCTGTTAC
TGCTCAGCAGTCTGGCGTTCCTGCCCGCCCTGCTACTGATGATGACCTGCTTCACTCGCATCATTATCGTGTTCAGTCTG
CTGCGCACGGCCATGGGCACCCAATCGGCTCCGCCCAACCAGGTGCTGCTCGGACTTACCCTGTTTCTTACTTTTTTTAT
TATGTCGCCGGTGTTGAACCGGGTGTACCAGGAAGCCTGGGTCCCCTTATCCAACGATGAAATGGGCTTCGAGCAGGCGC
TCAGTGTGGGCAGCGAGCCGTTCCGGGAATTCATGATGGCACAGACCCGGGAACCGGATCTGGCGTTGTTTGCCCGGCTG
GCCAAGACGGAGAACCTGAATGGACCGGAGGACGTGCCGCTTCGCGTATTGCTGCCCGCGTTCGTGACCAGTGAACTGAA
GACCGCGTTTCAGATCGGCTTCACCATTTTTATTCCGTTTCTGATCATTGATCTGGTGGTGGCCAGTGTGCTGATGGCGC
TGGGTATGATGATGGTGCCGCCGGCCACCATTTCATTGCCCTTCAAACTGATGCTGTTCGTGCTGGTGGACGGTTGGCAA
TTGCTGATCGGCTCGCTGGCACAAAGCTTTTTCGTCTGA

Protein sequence : 
MKRGPRWRLLAALLLPALMLPGLAWAQASIPGLTSQPTADGGQQWSIQLQTLLLLSSLAFLPALLLMMTCFTRIIIVFSL
LRTAMGTQSAPPNQVLLGLTLFLTFFIMSPVLNRVYQEAWVPLSNDEMGFEQALSVGSEPFREFMMAQTREPDLALFARL
AKTENLNGPEDVPLRVLLPAFVTSELKTAFQIGFTIFIPFLIIDLVVASVLMALGMMMVPPATISLPFKLMLFVLVDGWQ
LLIGSLAQSFFV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 7e-21 44
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 2e-21 43
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 2e-21 43
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 2e-21 43
yscR NP_456109.1 putative type III secretion protein Virulence SPI-2 Protein 2e-26 43
yscR NP_805090.1 type III secretion system protein Virulence SPI-2 Protein 2e-26 43
ssaR CAA68199.1 secretion system apparatus, SsaR Virulence SPI-2 Protein 8e-27 43
ssaR YP_216427.1 type III secretion system protein Virulence SPI-2 Protein 1e-26 43
ssaR NP_460384.1 type III secretion system protein Virulence SPI-2 Protein 1e-26 43
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 5e-27 43
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 5e-27 43
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 1e-26 42
hrcR ABQ88359.1 HrcR Virulence Hrp PAI Protein 1e-15 42
hrpW AAB05075.1 HrpW Virulence Hrp PAI Protein 1e-15 42
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 2e-26 42
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 2e-26 42
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 1e-26 42
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 2e-25 42
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 6e-26 41
hrcR AAT96146.1 HrcR Virulence T-PAI Protein 1e-15 41
hrcR AAT96200.1 HrcR Virulence T-PAI Protein 1e-15 41
hrcR AAB06005.2 HrcR Virulence Hrp PAI Protein 2e-23 41
hrcR YP_198720.1 type III secretion system protein Virulence Hrp PAI Protein 5e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_006822033.1 flagellar biosynthetic protein VFG2338 Protein 5e-63 74
fliP YP_006822033.1 flagellar biosynthetic protein VFG2494 Protein 1e-57 68
fliP YP_006822033.1 flagellar biosynthetic protein VFG1259 Protein 5e-50 59
fliP YP_006822033.1 flagellar biosynthetic protein VFG2016 Protein 3e-45 56
fliP YP_006822033.1 flagellar biosynthetic protein VFG0519 Protein 4e-27 43
fliP YP_006822033.1 flagellar biosynthetic protein VFG0188 Protein 1e-29 43
fliP YP_006822033.1 flagellar biosynthetic protein VFG0394 Protein 8e-29 43
fliP YP_006822033.1 flagellar biosynthetic protein VFG0044 Protein 1e-27 41