Gene Information

Name : kdsB (B5T_02810)
Accession : YP_006821421.1
Strain : Alcanivorax dieselolei B5
Genome accession: NC_018691
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3109790 - 3110554 bp
Length : 765 bp
Strand : -
Note : -

DNA sequence :
ATGAGTTTTTCCGTGGTGGTGCCGGCCCGCTATGCGTCGGCGCGTCTGCCGGGCAAGGCGTTGGCGGATCTGGCCGGTAA
GCCGATGGTGTTGCGGGTGGCGGAGCGCTGCCTGCTCAGCGCCGCCGGGCAGGTGTGGGTGGCCACCGATGATCAGCGTA
TCGCCGATGCCGTGGGCGAACGCTGTCCGGTGGTGATGACGCGGCCGGATCATCCTTCCGGTACCGATCGTTTACAGGAA
GTGGTGACGCAACTGGGGCTCGCCGACGACGACATCATCGTCAATGTGCAGGGGGACGAGCCCCTGATTCCGCCGGAGGT
GATCAATCAGGTGGCGGAAAATCTGGCCGCCAATCCGGATTGTCAGATGGCCACGTTATGCGAGCCGATCACCGCCGCCG
GGGACCTGTTCAGCGCGGACATTTGCAAGGTGGTGTTCGACAACCGTGGCCGTGCCCTGTATTTCTCGCGGGCGCCGATT
CCCTGGGATCGCACCGCGTTCGCCAAGGATCGAGAGCAGCTTGGTGACGGGGAATGGTGGCGGCACATTGGTATCTATGC
CTACCGTGCCGGTTTTCTGCACCAGTTCGTCAACTGGCCGCCGGCGCCGCTGGAGAAACTGGAATCCCTGGAACAATTGC
GGGCACTGGCTAATGGCGCGGCGATTCATGTGGCGCCGGCCTGCAAGGACGTGCCCGGTGGCGTGGATACGCCGGAGGAT
CTGGAACGTATGCGGACTTTGCTGCGGGGAGGGGCGCATGACTGA

Protein sequence :
MSFSVVVPARYASARLPGKALADLAGKPMVLRVAERCLLSAAGQVWVATDDQRIADAVGERCPVVMTRPDHPSGTDRLQE
VVTQLGLADDDIIVNVQGDEPLIPPEVINQVAENLAANPDCQMATLCEPITAAGDLFSADICKVVFDNRGRALYFSRAPI
PWDRTAFAKDREQLGDGEWWRHIGIYAYRAGFLHQFVNWPPAPLEKLESLEQLRALANGAAIHVAPACKDVPGGVDTPED
LERMRTLLRGGAHD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 5e-41 44
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 4e-41 44
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 1e-41 44