Gene Information

Name : B5T_02199 (B5T_02199)
Accession : YP_006820816.1
Strain : Alcanivorax dieselolei B5
Genome accession: NC_018691
Putative virulence/resistance : Virulence
Product : type VI secretion ATPase, ClpV1 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2410779 - 2413481 bp
Length : 2703 bp
Strand : +
Note : -

DNA sequence :
ATGAGCATTAACCTGAAAACACTGATCAGCAAACTCAACGACCGCTGCCGGCAGGCGGCGGAGAGGGCCGCCAGCCTGTG
CATGGCCGCGGGACATTACGAAGTCGATCTGGAGCATTTGTTCGTGGCGTTGCTGGAGCAGCCACAAAGCGATCTGGTTC
TGGTAGCACGCCGTAGCGGCATAGCGCCGGATGCACTGGAACGAGACCTTCGCGTTGAGATGGAAAGACTGAAAACCGGT
AATCAGCGTACCCCGGTGTTCTCTCCGCATCTGCCGACACTGTTCGAACATGCCTGGCTGCTGGCCTCGCTGGATTCCGG
CACCACCCGTATCCGCAGCGGGCATCTGTTGCTGGCGTTGTTGACGGAACCGGACCTCTCTCGCCTGGCGCAACGCAGTT
CCGCGCTATTTACCCGGTTTGATCTGGAGCAACTCAAGCACGACTTCGACAAAATGACGGAAGGGTCGGAGGAAGGGCAT
CGTGATGCACCTCTGACGGAAGACGCGCCCAGCGAGGAAGGCGAGGGCAAAGCGCTCGGCAAGACGCCGGCTCTGGATCA
GTTCACCCAGAATCTCACTGACCGGGCCCGGGAAGGCGCCATTGACCCAGTCATCGGCCGTGATGGTGAGATCCGTCAGT
TGGTGGACATCCTCATGCGCCGGCGTCAGAACAACCCGATCCTCACCGGTGAAGCCGGGGTGGGCAAAACGGCGGTGGTG
GAAGGGCTGGCGTTGCGGATCGCGGCCGACGATGTGCCGGAACCGCTCAAGGGCGTGGCGTTGCACGTCCTTGATATGGG
CTTGTTGCAAGCCGGTGCCAGTGTCAAAGGTGAGTTCGAGAACCGGCTCAAGACGGTGATTGACGAGGTCAAGAAAAGCG
CCCATCCGATCATCCTTTTCATCGACGAAGCCCATACCCTGATCGGTGCCGGCGGCCAGGCCGGCCAGAACGATGCCGCC
AATCTGTTGAAGCCGGCACTGGCCCGCGGCGAGCTGCGCACCATCGCCGCCACCACCTGGAGTGAGTATAAGCGCTACTT
CGAAAAAGACGCGGCGCTGGCCCGGCGCTTCCAGGTAGTGAAGGTGGATGAACCCAGTGAAGACCTGGCCGCTGCCATGC
TGCGTGCCATGGTTCCATTGATGGAGCAGCATTTTGGTGTGCGCATCCTCGACGAAGCCGTTACCGAGGCGGTGAGATTG
TCGCACCGTTACATCAGCGGCCGGCAACTGCCGGACAAGGCGGTATCGGTATTGGATACCGCCTGCGCCAAAGTCGCGCT
GGGGCAGGGCGCCACGCCCGCCGCTATCGAGGACGCCGACAAATATCTTCAACGCCTGGACCAGGAAATCGCCGCGCTGT
CCCGGGACGAGCAGGCCGGGGCCTCCCACGGAGAACGCCTGGCGGATTTGGAAAGCGAGCGGGCGGAGACCCAGGACCGC
ATCGTTACTCTGCGGGAACGTCTCGACCGGGAAGTGGCATTGGTACAGAGCATCCAGCAGCGACGGGATGGCCGGGAGGA
GGCGGCGGCCGCTGGCCAGGCCGGTCCCGATCACAGTATCCCCGAGCTGTTATCCCGGTTGCGGGAGGTGCAAGGCGAGA
CGCCCATGGTGCCTTTGCAAGCCGACGGCTCGGTGGTGGCGGAGATCGTCTCCAATTGGACCGGGATTCCCCTGGGCCGC
ATGGTCAAGGATGAGATCGCGACCATTTCCAATCTGTCCGCTCTGTTGGCGGAGCGGGTTACCGGACAACAGCATGCACT
GGATGCCATTGCGCAACGGGTGCGCACCGCCACCGCCAGGCTGGAAGATCCCAACAAGCCCAGAGGCGTGTTTCTGTTCG
TCGGGCCCTCCGGCGTGGGTAAAACCGAAACCGCGCTGGCACTGGCCGACATTCTCTACGGTGGCGAGCGCAAGCTGATC
ACCATCAATATGAGCGAGTATCAGGAAGCGCATACGGTTTCCGGCCTGAAAGGCTCGCCACCCGGGTATGTGGGTTACGG
CGAGGGTGGGGTGCTGACCGAAGCGGTACGCCGCAATCCCTATAGCGTGGTGTTGCTGGACGAAGTGGAGAAGGCGCATC
CGGACGTACTGGAAATGTTTTTCCAGGTCTTCGACAAGGGCGTGATGGACGATGCCGAAGGGCGCGAAATCGATTTCCGC
AACACTCTGATCATTCTTACGTCCAACGTCGGCTCCTCGCAGATCATGCAATCCTGTCTGAACCAGGAAGCACAACAACT
GCCCGACCCGGAGGCACTCCATGAACTGTTGCGGCCGGCGCTTTACAAGGCCTTCAAACCCGCCTTCCTGGGACGGCTCA
AAGTGGTGCCGTACTACCCGATCAGCGATGACGTCCTGGTCCGCATCATCGAGATGAAACTGGACCGCATCGCGCGCCGG
GTGGCGGAGAATCATGGCGCCCTGTTCGAATGGGACGACGCCTTGGCGGAATCGGTGCTGGCCCGTTGCACCGAGGTGGA
CAGCGGCGCTCGCAATGTGGACCACATTCTCAACGGCACGCTTTTGCCGGAAATTGCCGAGTCCGTCCTCGCCGCCATGG
CCGAGGGCGCTAAAATAGCCAGTATCCGGGTGACCGCGGATGACAACGGTGATTTTCAATACACGGTAACGCCGGAAGGC
GTGCCGTCAACCGGAGCCGAGTCTCCACAAATCTTGTCCTTTCATCACAGGAGTGAATCATGA

Protein sequence :
MSINLKTLISKLNDRCRQAAERAASLCMAAGHYEVDLEHLFVALLEQPQSDLVLVARRSGIAPDALERDLRVEMERLKTG
NQRTPVFSPHLPTLFEHAWLLASLDSGTTRIRSGHLLLALLTEPDLSRLAQRSSALFTRFDLEQLKHDFDKMTEGSEEGH
RDAPLTEDAPSEEGEGKALGKTPALDQFTQNLTDRAREGAIDPVIGRDGEIRQLVDILMRRRQNNPILTGEAGVGKTAVV
EGLALRIAADDVPEPLKGVALHVLDMGLLQAGASVKGEFENRLKTVIDEVKKSAHPIILFIDEAHTLIGAGGQAGQNDAA
NLLKPALARGELRTIAATTWSEYKRYFEKDAALARRFQVVKVDEPSEDLAAAMLRAMVPLMEQHFGVRILDEAVTEAVRL
SHRYISGRQLPDKAVSVLDTACAKVALGQGATPAAIEDADKYLQRLDQEIAALSRDEQAGASHGERLADLESERAETQDR
IVTLRERLDREVALVQSIQQRRDGREEAAAAGQAGPDHSIPELLSRLREVQGETPMVPLQADGSVVAEIVSNWTGIPLGR
MVKDEIATISNLSALLAERVTGQQHALDAIAQRVRTATARLEDPNKPRGVFLFVGPSGVGKTETALALADILYGGERKLI
TINMSEYQEAHTVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLEMFFQVFDKGVMDDAEGREIDFR
NTLIILTSNVGSSQIMQSCLNQEAQQLPDPEALHELLRPALYKAFKPAFLGRLKVVPYYPISDDVLVRIIEMKLDRIARR
VAENHGALFEWDDALAESVLARCTEVDSGARNVDHILNGTLLPEIAESVLAAMAEGAKIASIRVTADDNGDFQYTVTPEG
VPSTGAESPQILSFHHRSES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 5e-164 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B5T_02199 YP_006820816.1 type VI secretion ATPase, ClpV1 family VFG2076 Protein 0.0 52
B5T_02199 YP_006820816.1 type VI secretion ATPase, ClpV1 family VFG2084 Protein 2e-156 45
B5T_02199 YP_006820816.1 type VI secretion ATPase, ClpV1 family VFG0079 Protein 1e-100 42