Gene Information

Name : B5T_01389 (B5T_01389)
Accession : YP_006820014.1
Strain : Alcanivorax dieselolei B5
Genome accession: NC_018691
Putative virulence/resistance : Virulence
Product : iron transmembrane ABC transporter component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1475913 - 1476833 bp
Length : 921 bp
Strand : +
Note : -

DNA sequence : 
ATGACGTTGATCGATACGCTGCTGGCGCCGTTTCAGTTCGAGTTCATGGTCAATGCCCTGATCGTCGCCATGCTGGTGGC
GGTACCCATGGCGCTGCTGTCCTGCTTTCTGGTGCTCAAGGGCTGGTCGCTGATGGGCGACGCCATGTCCCATGCGGTGT
TTCCCGGGGTGGTGGTGTCCTACCTGATCGGTATTCCTTACGCGGTGGGCGCGTTCATCGCCGGCATGCTGTGCGCCGTG
GCCACCGGCTTCCTCAACCATCACAGCCGGGTCAAACAGGACACGGTGATGGGGGTGGTGTTCGCCGGCATGTTCGGACT
GGGTCTGGTGCTGTACGTGAAGATCCAGTCGGAAGTCCACCTCGACCATATCCTGTTCGGCGACCTGCTCGGTGTCGCCG
GCCCGGACCTGCTGGCCGCGGCACTGATCGCGCTGATCACCGCCGGTGTCATCGGGCTTAAATGGAAGGACCTGTTACTG
CACGCCTTCGATCCGGCCCAGGCCCGGGCGGTGGGTCTGAAAACCGGCTGGCTGCATTACGGACTGCTGGCGTTGATCTC
GATGACCATTGTCGGGGCGCTGCAGGCGGTGGGGGTGGTTCTCGCCATCGCTCTGCTGATCGCGCCCGGCGCCATCGTTT
TCCTGCTGACTCGCACTTTCGGCGCGATGTTGCTGCTGTCGGTGCTGGTGGCGGTGTTCGGTGCTTTCAGTGGTGTCTAT
CTGTCTTTCTTTATCGACAGCGCGCCGGCGCCCACCATCGTACTGATTCTGTCGGCGCTGTTCGTCGTTGCCTTCGTGCA
CGCCGGCCGCAAGACCAGACGCCGGCAATCGGCGGAATGGACCGGGGTGCGGACCAGGGAGGCACGCCGTCGGGCGGCCG
CGGAGTGTTGCCCGCTGATTCAGAATCGACAGGGCTCCTGA

Protein sequence : 
MTLIDTLLAPFQFEFMVNALIVAMLVAVPMALLSCFLVLKGWSLMGDAMSHAVFPGVVVSYLIGIPYAVGAFIAGMLCAV
ATGFLNHHSRVKQDTVMGVVFAGMFGLGLVLYVKIQSEVHLDHILFGDLLGVAGPDLLAAALIALITAGVIGLKWKDLLL
HAFDPAQARAVGLKTGWLHYGLLALISMTIVGALQAVGVVLAIALLIAPGAIVFLLTRTFGAMLLLSVLVAVFGAFSGVY
LSFFIDSAPAPTIVLILSALFVVAFVHAGRKTRRRQSAEWTGVRTREARRRAAAECCPLIQNRQGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD NP_461785.1 permease Virulence SPI-1 Protein 3e-71 66
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 2e-71 66
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 6e-71 65
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 5e-71 65
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 5e-71 65

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B5T_01389 YP_006820014.1 iron transmembrane ABC transporter component BAC0352 Protein 1e-71 66
B5T_01389 YP_006820014.1 iron transmembrane ABC transporter component BAC0442 Protein 7e-52 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B5T_01389 YP_006820014.1 iron transmembrane ABC transporter component VFG0528 Protein 1e-71 66