Gene Information

Name : znuB (B5T_01388)
Accession : YP_006820013.1
Strain : Alcanivorax dieselolei B5
Genome accession: NC_018691
Putative virulence/resistance : Virulence
Product : Mn2+/Zn2+ ABC transporter permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1475056 - 1475916 bp
Length : 861 bp
Strand : +
Note : -

DNA sequence : 
ATGAGCGCCTTGCTGCTGGAACCGTTCGGCTACCACTACATGGTCAACGCCATGTGGGTATCCGCGCTGGTCGGCGGCGT
CTGCGCGTTTCTGTCCTGTTTCCTGATGCTCAAAGGCTGGTCGCTGATCGGTGACGCCTTGTCGCATTCCATCGTGCCCG
GTGTGGCGGGGGCCTACCTGTTCGGACTGCCCATGTTTATCGGTGCGTTCTTCTCCGGTGGCCTGGCGGCGGCCGCCATG
CTGTTTCTCAATCAGCGCACCAAACTGCGGGAGGACGCGGTGATCGGCCTGATCTTTTCCGCGTTCTTCGGGTTGGGTCT
GTTCATGGTTTCCCTGTCGCCCACTTCGGTGAACATCCAGACCATCGTGCTGGGCAACATTCTCGCCATCACGCCGGCGG
ACACGCTGCAACTGGCGGTGATCGGCCTGGTCTCCCTGGCCGTGCTGCTGATCAAATGGAAGGACCTGATGGTGACTTTC
TTTGACGAGAGTCACGCGCGCTCCATCGGTCTCAATCCGACCCGGCTCAAGATCCTGTTCTTCACCTTATTGTCGGCGTC
GACGGTGGCGGCGTTGCAGACCGTGGGCGCGTTTCTGGTGATCTGCATGGTGGTGACCCCCGGCGCCACGGCTTATCTGC
TCACCGACCGCTTTCCCCGGCTGCTGCTGATCGCCGTGGCGATCGGTTCGCTCACCAGCCTGACCGGCGCCTACGCCAGT
TATTTTCTCGACGGCGCCACCGGCGGCGTGATCGTGGTGCTGCAGACGCTGATCTTTCTGCTGGTGTTTCTGCTGGCGCC
GAAGCACGGTTTGCTGGCCGCGCGCAAAAGGGCGGCACGGGCCTGCGCGGAGCCGGTATGA

Protein sequence : 
MSALLLEPFGYHYMVNAMWVSALVGGVCAFLSCFLMLKGWSLIGDALSHSIVPGVAGAYLFGLPMFIGAFFSGGLAAAAM
LFLNQRTKLREDAVIGLIFSAFFGLGLFMVSLSPTSVNIQTIVLGNILAITPADTLQLAVIGLVSLAVLLIKWKDLMVTF
FDESHARSIGLNPTRLKILFFTLLSASTVAALQTVGAFLVICMVVTPGATAYLLTDRFPRLLLIAVAIGSLTSLTGAYAS
YFLDGATGGVIVVLQTLIFLLVFLLAPKHGLLAARKRAARACAEPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-84 80
sitC NP_461784.1 permease Virulence SPI-1 Protein 2e-84 80
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 2e-84 80
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 2e-84 80
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 2e-84 80
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 2e-38 42
sitD NP_461785.1 permease Virulence SPI-1 Protein 2e-38 42
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 1e-38 42
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-38 42
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 2e-38 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
znuB YP_006820013.1 Mn2+/Zn2+ ABC transporter permease BAC0351 Protein 1e-84 80
znuB YP_006820013.1 Mn2+/Zn2+ ABC transporter permease BAC0441 Protein 2e-69 71
znuB YP_006820013.1 Mn2+/Zn2+ ABC transporter permease BAC0352 Protein 7e-39 42
znuB YP_006820013.1 Mn2+/Zn2+ ABC transporter permease BAC0442 Protein 2e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
znuB YP_006820013.1 Mn2+/Zn2+ ABC transporter permease VFG0527 Protein 9e-85 80
znuB YP_006820013.1 Mn2+/Zn2+ ABC transporter permease VFG0528 Protein 7e-39 42