Gene Information

Name : sitB (B5T_01387)
Accession : YP_006820012.1
Strain : Alcanivorax dieselolei B5
Genome accession: NC_018691
Putative virulence/resistance : Virulence
Product : Mn+2/Fe+2 ABC transporter ATPase SitB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1474160 - 1475059 bp
Length : 900 bp
Strand : +
Note : -

DNA sequence : 
ATGAACGCCGTTGCCGCCCGCCTTGCCGAATGTGTCGCCCGCCAGCACGGAGAGGGGATCGCCGTGCAACAGGCCACGGT
GACCTACCGCAACGGCCATACCGCGTTGCGCGACGCCAGCTTTTGCATTCCGCGCGGCACCATCGCGGCGCTGGTTGGTG
TCAACGGCTCGGGCAAGTCCACGCTGTTCAAGTCGATCATGGGATTCGTGCGTTTGGCCCGGGGCGACATTCGCGTGCTC
GGCATGCCGATCCGGCAAGCCCTGCGGCGCAATCTGGTGGCCTATGTGCCGCAGGCGGAAGAGGTGGACTGGAATTTCCC
GGTGCTGGTGGAAGACGTGGTGATGATGGGACGCTACGGCCATATGGGCCTGTTGCGCCGGGCCCGGGCCGCCGATCACC
GGGCGGTGGAGACGGCGTTGGCGCGGGTGAATATGAGCGACTTCCGCAAACGGCAGATCGGCGAGCTGTCCGGCGGACAG
AAAAAACGGGTGTTCCTCGCTCGCGCGCTGGCCCAGGACGGCCAGGTGATTCTGCTCGACGAGCCGTTCACTGGTGTCGA
CGTGAAAACCGAGGAGCAGATCATGGCGCTGTTGCGGGAGCTGCGCGAGGAGGGCCGGGTGATGCTGGTTTCGACGCATA
ATCTCGGCAGTGTGCCGGAGTTCTGTGATCGCACCATTCTGATCAAGCGTACCGTTCTCGCCCATGGCCTCACCAGCGAG
GTGTTTACCCAGCGGAATCTGGAGCAGGCGTTTGGCGGTGTGCTGCGGCACTTCGTCGTCAATGAGGCGGGCAGCGGCAT
GCCGATCCCGATTGGCGTGTTCACCGACGACGAGCGGCCGCTGATTCTCAGGGGCGGCCGGGCCTCGGCCCGCGCGGCAG
GGAATGGCGATAACCTATGA

Protein sequence : 
MNAVAARLAECVARQHGEGIAVQQATVTYRNGHTALRDASFCIPRGTIAALVGVNGSGKSTLFKSIMGFVRLARGDIRVL
GMPIRQALRRNLVAYVPQAEEVDWNFPVLVEDVVMMGRYGHMGLLRRARAADHRAVETALARVNMSDFRKRQIGELSGGQ
KKRVFLARALAQDGQVILLDEPFTGVDVKTEEQIMALLRELREEGRVMLVSTHNLGSVPEFCDRTILIKRTVLAHGLTSE
VFTQRNLEQAFGGVLRHFVVNEAGSGMPIPIGVFTDDERPLILRGGRASARAAGNGDNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 6e-86 72
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 6e-86 72
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-86 72
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 5e-86 71
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 4e-86 71

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitB YP_006820012.1 Mn+2/Fe+2 ABC transporter ATPase SitB BAC0350 Protein 2e-86 71
sitB YP_006820012.1 Mn+2/Fe+2 ABC transporter ATPase SitB BAC0440 Protein 2e-76 62
sitB YP_006820012.1 Mn+2/Fe+2 ABC transporter ATPase SitB BAC0400 Protein 9e-48 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitB YP_006820012.1 Mn+2/Fe+2 ABC transporter ATPase SitB VFG0526 Protein 2e-86 71