Gene Information

Name : sitA (B5T_01386)
Accession : YP_006820011.1
Strain : Alcanivorax dieselolei B5
Genome accession: NC_018691
Putative virulence/resistance : Virulence
Product : iron ABC superfamily ATP binding cassette transporter, binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1473255 - 1474163 bp
Length : 909 bp
Strand : +
Note : -

DNA sequence : 
ATGCTTGGGAAGGCGATTCGGCCGGTTCTGATTCTGGGGGCCGGCGCGGCGCTGATCATGCTGTCGGCGATGACACCGGC
AATGGCCGGGGACAAGTTCAAGGTGGTCACCACCTTCACGGTGATCGCCGACATTGCCCGCAACGTGGCCGGAGAGGCCG
CCACGGTGGAGTCCATCGTCAAGCCGGGGGCGGAGATCCACAACTATCAGCCCACCCCTGGTGATATCAAACGCGCCCAG
GGTGCGCGTCTGATCCTCTGGAACGGCTTGAATCTGGAGTCGTGGTTCGAACGCTTCTTCCGCCATTTGCGGGACGTGCC
CGGGGTGGTGGTGTCGGACGGGATCGAGCCGCTGGGTATCGGCGAGGGGCCCTACAGCGGCAAGCCCAATCCCCATGCCT
GGATGTCCCCCGTTTCCGCGTTGATCTACGTGGATAACATTCGTGATGCACTGGTGCGTTACGACCCGGGCAACGCGGAC
ACCTACCGACGCAACGCCGAGCAATACAAAGCCCGCATCCGGGCGCTGGTCGAACCAATTCGCCAGGAACTGGCGGCGGT
GCCCGAGGCGCGGCGCTGGCTGGTGACCAGCGAGGGCGCCTTCTCTTATCTGGCCCGTGATTTTGATCTGAAGGAACGGT
ATCTGTGGCCGATCAACGCGGACCAGCAAGGCACGCCCCAGCAGGTCCGCGAAGTGATTGATACGGTCAGGGCGGAAAAC
ATCCGTGTGGTGTTTTCCGAAAGCACTGTGTCCGCTTCCCCGGCCCGTCAGGTGGCGCGGGAAACCGGTGCTGCTTACGG
CGGCGTGCTCTATGTGGATTCCCTCACCGGCCCGGACGGCCCGGTGCCCACCTATCTGGATCTGCTGCGGGTCACCGCCG
CCACCATCGCCAAAGGTCTGACTCAATGA

Protein sequence : 
MLGKAIRPVLILGAGAALIMLSAMTPAMAGDKFKVVTTFTVIADIARNVAGEAATVESIVKPGAEIHNYQPTPGDIKRAQ
GARLILWNGLNLESWFERFFRHLRDVPGVVVSDGIEPLGIGEGPYSGKPNPHAWMSPVSALIYVDNIRDALVRYDPGNAD
TYRRNAEQYKARIRALVEPIRQELAAVPEARRWLVTSEGAFSYLARDFDLKERYLWPINADQQGTPQQVREVIDTVRAEN
IRVVFSESTVSASPARQVARETGAAYGGVLYVDSLTGPDGPVPTYLDLLRVTAATIAKGLTQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-100 73
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 1e-100 73
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 1e-100 73
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 1e-100 73
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 9e-101 73

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitA YP_006820011.1 iron ABC superfamily ATP binding cassette transporter, binding protein BAC0349 Protein 5e-101 73
sitA YP_006820011.1 iron ABC superfamily ATP binding cassette transporter, binding protein BAC0439 Protein 3e-93 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitA YP_006820011.1 iron ABC superfamily ATP binding cassette transporter, binding protein VFG0525 Protein 5e-101 73