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Name : ASU2_03875 (ASU2_03875) Accession : YP_006817152.1 Strain : Actinobacillus suis H91-0380 Genome accession: NC_018690 Putative virulence/resistance : Unknown Product : putative type I site-specific restriction-modification system, restriction subunit Function : - COG functional category : - COG ID : - EC number : - Position : 829592 - 832732 bp Length : 3141 bp Strand : - Note : COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases DNA sequence : ATGCACATCAACGAAAACACAATAGAGCAAGCCTGTATTCAGGCATTACAAGGCTTGGGGTGGGCTTATACCTTTGGTTC GGAGATTGAGCGGGAGCGAGCTGAAGAGGTGGTGCTGAAATCGGTGTTGGCGAATGCGATAACAAGGCTAAATCCGCAGT TACCGAGTAATGTGGTCAATGACGTGGTGGCGTTGGTGTGTAAGGGCGATATTACCGATTTAACTGAGCGTAATCAGCAA TTTTACCGCTTGTTGCGTGAAGGCGTGCAGGTGGAGTATCGTGAAAATGATGAGCAGAAAATCGACATTGTTCGTTTGAT TGATTTTCAAAATGTTCACAACAACCAGTTTGATGTGGTAAATCAATTTACCATTAAGGGGGTGAAAGGCAACCGCCGCC CTGATGTGATTTGCTTTGTGAATGGTTTGCCGTTGGTGGTGTTTGAGTTGAAAAATCCGCTTACAGAATCAGCCGATTTG CAACAGGCATTTCAGCAGTTCCAAACTTATAAAGCGGAAATTAGCGATCTCTTTGTTTTCAACCAAGCCCTTGTGATTAG TGACGGTACGCACGCTCGCATTGGTTCTTTAACCGCCAATTTTGACCGCTTTACACCGTGGCGAGTGGTGGACGAAAAAG CTAAACAGCGAGTGCCGTTTGAGAATGAATTGGCGGGGCTGGTGCAAGGCTTGATGTCGCCTGAAAATTTACTCAATTAT GTGCAGAATTTCGTGCTATTTGAGCGTTCGGAAAGCGGTCTGTTAATCAAAAAAATTGCCGCTTATCATCAATTCTATGG CGTGAATGAGGCAGTGGAGTCCACGTTGCTTGCCGCAAGCGAGCAAGGCGATCGCAAAATTGGGGTAATGTGGCATACGC AAGGTTCGGGCAAATCCATTTCGATGCTGTTCTATGCGGCAAAATTGCAAGCCGAGCCAAGCTTACGCAACCCAACCATT GTAGTGGTAACCGACCGTAACGACTTAGACGGTCAGCTATTTGCGACCTTTTCAGCGGGTAAAGATCTTATTCGCCAAAC ACCCATTCAAGCAGACGGACGAGAAGCATTGCGAACCGAGCTTGCCAAGCGTGAAACAGGCGGCATTATTTTTACCACCA TTCAAAAATTTGGCTTGCACGAGGGCGAAAATCAGCACCCGATTTTGAATGATCGCCACAACATTATCGTCATCAGCGAT GAGGCTCATCGTTCGCAATATGGTTTTAGCCAACATTTAGCTATGGGAACACAATCCGCTACTTACCGAGTGGGCTATGC CAAACATTTACGAAATGCGTTGCCGAATGCCTCGTTTATTGGCTTTACTGGTACGCCAATTTCCCTTGAAGATAAAGATA CTCAAGCAGTGTTTGGGCGTTATGTGTCGATTTACGACATTCAAGATGCGGTGGAAGACGGTGCAACCGTGCCGATTGTG TATGAGGCTCGCCAAATTCCGATTAACGAGAGCCAAGATTTCAAAAATGCGGTGCGTGAGGCGGACGATTTATTTTCGGA CGATGAGCAAAGTTACAGTTTCCGCTTGCGTGAAAAGCTAATAGGGGCGGATACACGGCTCACAAAATTAGCGGAAGATT TGGTAAAACATTTTGAAAATCGCACCGCTTTAATGGACGGTAAGGCGATGATTGTGGCAATGAGCCGTCAAATTTGTGTG GTGTTGTATGACAAAATCATTGCCCTTCGCCCTGAATGGCATAGCGATAATCTCAACGAAGGGGCGATTAAAATTGTGAT GACAGGCTCAGCAAGTGATCCTGACCATTTTCAACCGCACATTTATGGCAATCAAGAGAAGAAAAGCCTCGAAAAACGTT TTAAAGATCCGAGTGATCCGTTCAAACTTGTGATTGTGCGAGATATGTGGCTGACAGGTTTTGACGCCCCTTGTTGTAAT ACAATGTATATCGACAAGCCGATGAAAGGGCATAATTTAATGCAGGCAATTGCCCGAGTAAACCGTGTTTTCCGCAATAA AAGCCGTGAAAATGGTGGGTTAATTGTCGATTATGTGGGCTTGGTGGACGAACTTAAATCGGCAACGGCTGAATATACCA ATGCAAATGGTAAGGGCGAAATGACGCAAGATATTGAGCAAATCAAACTCAAATTTTTAGAGTGCCTTGATATTGTGCGA GGAATGTTTGCCAGCCCTGTAAGCGGCCAGATTTTTCCATTATTTGACGCATTAAAAATTCACGATGAAATGGCGTTATT TGAGCAAATTCTAACGGCAGCAAACCATATTTTAAGCCTCGATCAGCAAAATCCTGTTGATGACAAAGCGAAGGATAAAA CGCCACGCAAAAATCGCTTCTTGCAAGCGGTAAGATTAGCGAAAAAGGGTTACGGTTTGTGTGGTTCGTTGCCTGAAGTG CAGGTTTATCAGCGAGAATTAGCGTTTATTGATGCGGTGCGAGCAATGCTTGCAAAACGTGAGCCAAATTCGACCGTTAA CCCTGCCGACCGACAGCTTAAATTGGTGGCGTTGCTAAACCAAGCGGTAAAAGCCGATGGGGCAGTGGACTTATTTGCGT TGCTTAATCGAGATCAGCCGAACATTGAGATTTTGTCGGAGCAGTTTTTAGAAAAAGTGAAAAATAGCCGCCACCAAGCG TTGTGGCTTGAGGCGATTCAACGTTATCTGCAAGCGGAAATTAAGGAAAAAGGAGCGAGTAATCTTTCCGTGCAAAAAGA TTTTGAAACTCGATTAAAAGAGGCGATGAATAAATATCGCAATCAAAATCTCACGTTACTTGAAATTTTGGACGAATTAT TGGCAATGGGGAAAGAATTTGCCGAACGTTTGGCTCGTGGCGAAAAATTAGGGCTAACGCCTGCGGAAATCGCCTTTTAT GACGCTTTGGCTCAAAACGAAAGTGCGGTGCGAGAATTAGGCGATGAAGTCTTGAAAAATTTGGCAATGACAATCACCGA GAAGATCCGCCAATCTGCCACCATTGACTGGCAATTTAAAGATTCCGTGCGAGCCAAAATGCGAATTGAAATCCGCCGAG CGTTAAGATTATTCAAATATCCGCCCGATAAACAAGTGGAAGCAGTTGAGTTTGTATTAAGACAAGCGGAAGTGATTGCC GATGAATTAAGTTCACCTTAG Protein sequence : MHINENTIEQACIQALQGLGWAYTFGSEIERERAEEVVLKSVLANAITRLNPQLPSNVVNDVVALVCKGDITDLTERNQQ FYRLLREGVQVEYRENDEQKIDIVRLIDFQNVHNNQFDVVNQFTIKGVKGNRRPDVICFVNGLPLVVFELKNPLTESADL QQAFQQFQTYKAEISDLFVFNQALVISDGTHARIGSLTANFDRFTPWRVVDEKAKQRVPFENELAGLVQGLMSPENLLNY VQNFVLFERSESGLLIKKIAAYHQFYGVNEAVESTLLAASEQGDRKIGVMWHTQGSGKSISMLFYAAKLQAEPSLRNPTI VVVTDRNDLDGQLFATFSAGKDLIRQTPIQADGREALRTELAKRETGGIIFTTIQKFGLHEGENQHPILNDRHNIIVISD EAHRSQYGFSQHLAMGTQSATYRVGYAKHLRNALPNASFIGFTGTPISLEDKDTQAVFGRYVSIYDIQDAVEDGATVPIV YEARQIPINESQDFKNAVREADDLFSDDEQSYSFRLREKLIGADTRLTKLAEDLVKHFENRTALMDGKAMIVAMSRQICV VLYDKIIALRPEWHSDNLNEGAIKIVMTGSASDPDHFQPHIYGNQEKKSLEKRFKDPSDPFKLVIVRDMWLTGFDAPCCN TMYIDKPMKGHNLMQAIARVNRVFRNKSRENGGLIVDYVGLVDELKSATAEYTNANGKGEMTQDIEQIKLKFLECLDIVR GMFASPVSGQIFPLFDALKIHDEMALFEQILTAANHILSLDQQNPVDDKAKDKTPRKNRFLQAVRLAKKGYGLCGSLPEV QVYQRELAFIDAVRAMLAKREPNSTVNPADRQLKLVALLNQAVKADGAVDLFALLNRDQPNIEILSEQFLEKVKNSRHQA LWLEAIQRYLQAEIKEKGASNLSVQKDFETRLKEAMNKYRNQNLTLLEILDELLAMGKEFAERLARGEKLGLTPAEIAFY DALAQNESAVRELGDEVLKNLAMTITEKIRQSATIDWQFKDSVRAKMRIEIRRALRLFKYPPDKQVEAVEFVLRQAEVIA DELSSP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 49 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 42 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 42 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 41 |
