|
Name : ASU2_03355 (ASU2_03355) Accession : YP_006817050.1 Strain : Actinobacillus suis H91-0380 Genome accession: NC_018690 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : - COG ID : - EC number : - Position : 717109 - 719025 bp Length : 1917 bp Strand : + Note : COG0550 Topoisomerase IA DNA sequence : TTGAGAGTATTTTTAGCGGAAAAACCAAGTTTAGCAAGGGCAATCGCAGACGTCTTGCCTAAGCCGCATACCCGTGGTGA TGGTTATATTCAATGTGGTGAACATGATGTGGTAACTTGGTGTATCGGCCATTTGTTAGAACAAGCTGAGCCGGACGCTT ATGATGAGCGTTTTAAAATGTGGCGTATGGAACATTTGCCGATTATTCCGCAACAATGGAAATTAGTGCCCAAAAAAGAA ACATTGAAGCAGCTACAAGCGGTCGAAAAATTGGTAAAAAAAGCAGATGTATTGGTAAACGCCGGCGACCCGGACAGAGA AGGGCAGCTGCTCGTTGATGAAGTGTTCAGCTATCTAAATGTACCGGCGGAAAAACGTGACCAGATTCAACGTTGTTTAG TCAGTGATCTCAACCCGAGTGCAGTAAAAAAAGCAATTGATAAATTGCAAAATAATCGTGATTTTATACCGCTTGCAACT TCAGCATTAGCACGTGCAAGGGCGGATTGGCTATACGGCATTAATATGACGCGTGCTTATACTTTACAAGGGCGTTGGGC AGGCTATCAGGGCGTATTATCGGTCGGGCGGGTACAAACTCCAGTATTGGGTTTGATTGTGCGCCGAGATTTGGAAATTG AACATTTTGTACCGAAAGACTATTTTGAAGTATTAGCCCATATCGTTGTACCGGAAACCCAAGGACGTTTTACCGCACAA TGGCAACCGAGTAAGGCTTGCGAAGATTATCAAGATGAAGACGGTCGTGTGTTATCCAAAAGTTTGGCGGAAAATGTGGT TAAACGCATTACCGACCAAGCTGCATTGGTAACGGACTATCAGGATAAAATTGAAACCGAAACGGCGCCACTGCCTTACT CATTATCGGTGTTACAAATTGATGCAGCACGTCGTTACGGTTTATCGGCACAGGTAGTGCTGGATATTTGTCAGAAGCTA TACGAAACACATAAGTTGATTACTTATCCCCGTTCGGATAACCGTTATTTACCGAATGAGCATTATGCCGACCGTTTTAA GGTAATGGCGGCAATCGCTCATCACTTAGATGAATATAAAGAAAAGCCTGAAGTGGTTAATCCGGAAATCCGTAACCGTT GTTGGAATGATAAAAAGGTTGACGCGCACCATGCCATTATTCCGACCGCTCGCCAAGGCTCGGTACAACTAACTGAAAAC GAAAAACGTATTTATCAATTGATTGCCCGTCAATACTTAATGCAATTTTGTCCGGATGCAGAATATCGAAAAGGTAAAAT TGTATTGGATATCGCTGGTGGAACATTTAATGCGCAAGCCCGAAACTTAATTGTTGCCGGTTGGAAATCATTACTAGGCA AAGAAGACAGTGATGAAGTACTAGAGCCGTTGTTACCAGTTGTGAAAAAAGGGCAGCAGTTACATTGTGAAAAGGGCGAG ATTGTCAGTAAGAAAACTCAGCCGCCTCGTCATTTTACCGATGCAAGTTTATTATCGGCGATGACCGGTATTGCGCGTTT TGTGCAAGATAAACAGCTTAAAAAGGTATTACGTGAAACGGACGGTTTAGGGACGGAAGCTACCCGTGCTGGGATCATCG AATTACTGTTCAAACGAGGATTTTTAGTCAAAAAAGGACGTAATATCCATAGCACGGAAGCAGGTCGAATTTTAATTAGT GCGTTGCCGGATGAAGCAACTCAGCCGGATATGACAGCACATTGGGAAATGCAATTGACCGACATCAGTAAAAAGCAAGC GAGTTATCAGCAATTTATGGCAACGTTAACCGGCAAGCTTCCTGAATTGTTACATACGGAAAGACAGAAATTGCAAAATT TGAGTCGAATCCAACCGCCTGCCTCTTATCGTAAGCGGTCAAATTTTAAGAAAAATTTACAAACTGCTGAAAAATAA Protein sequence : MRVFLAEKPSLARAIADVLPKPHTRGDGYIQCGEHDVVTWCIGHLLEQAEPDAYDERFKMWRMEHLPIIPQQWKLVPKKE TLKQLQAVEKLVKKADVLVNAGDPDREGQLLVDEVFSYLNVPAEKRDQIQRCLVSDLNPSAVKKAIDKLQNNRDFIPLAT SALARARADWLYGINMTRAYTLQGRWAGYQGVLSVGRVQTPVLGLIVRRDLEIEHFVPKDYFEVLAHIVVPETQGRFTAQ WQPSKACEDYQDEDGRVLSKSLAENVVKRITDQAALVTDYQDKIETETAPLPYSLSVLQIDAARRYGLSAQVVLDICQKL YETHKLITYPRSDNRYLPNEHYADRFKVMAAIAHHLDEYKEKPEVVNPEIRNRCWNDKKVDAHHAIIPTARQGSVQLTEN EKRIYQLIARQYLMQFCPDAEYRKGKIVLDIAGGTFNAQARNLIVAGWKSLLGKEDSDEVLEPLLPVVKKGQQLHCEKGE IVSKKTQPPRHFTDASLLSAMTGIARFVQDKQLKKVLRETDGLGTEATRAGIIELLFKRGFLVKKGRNIHSTEAGRILIS ALPDEATQPDMTAHWEMQLTDISKKQASYQQFMATLTGKLPELLHTERQKLQNLSRIQPPASYRKRSNFKKNLQTAEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 2e-107 | 41 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 2e-107 | 41 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 1e-107 | 41 |
