Gene Information

Name : ASU2_01380 (ASU2_01380)
Accession : YP_006816657.1
Strain : Actinobacillus suis H91-0380
Genome accession: NC_018690
Putative virulence/resistance : Virulence
Product : iron (chelated) ABC transporter, periplasmic-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 302457 - 303353 bp
Length : 897 bp
Strand : -
Note : COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin

DNA sequence : 
ATGAAACTTTCATTTTTAAAACAAGCATTTGTGGTCACATTAGGTATGAGTGCCGCCCTCTCAATGGCTGCACCGTTCAA
AGTTGTTACTACCTTTACCGTTATCCAAGATATTGCACAAAACGTTGCCGGTGATAAAGCGGTTGTAGAATCTATTACCA
AACCTGGCGCAGAAATTCATGACTATCAACCAACACCTAAAGATATTGCTAAAGCACAAAAAGCTGACCTTATCTTATGG
AACGGTATGAATTTAGAACGTTGGTTTGAACGTTTCTTTGAAAACGTAAAAGGTAAACCGGCTGTTGTTGTGACCGAAGG
CATTACGCCAATTGCAATTACTGAAGGTGAATATAAAAACTTACCGAATCCGCATGCGTGGATGTCATCAGCGAATGCTC
TGCAATATATTGAAAATATTCGTGCCGCATTAGTGAAATACGATCCGAAAAATGCCGAAAGCTATAACCAAAATGCTAAA
GCTTACGCTGAAAAAGTCAAAGCTATTGCAGAGCCTTTACGCCAACGCCTATCTGTTATTCCGGAAGCACAACGTTGGTT
AGTAACCAGTGAAGGTGCATTTAGTTATTTAGCACAAGATTATCAGTTAAAAGAACTTTATTTATGGGCAATCAATGCTG
AAGAACAAGGTTCTCCGCAACAAGTGAAAAAGGTGATCGACGGCGTAAAAGCTAACAATATCCCTGTTGTTTTCAGCGAA
AGTACCGTATCGGATAAACCGGCTAAACAAGTAGCAAAAGAAACTGGCGCATTATACGGCGGTGTATTATATGTCGATTC
ACTTTCAACCAAAGACGGCGCTGTACCGACTTATTTGGATTTATTAAAAGTGACAATCAGCACAATTGTTGACGGTTTTG
AAAAAAGCAAAAAATAA

Protein sequence : 
MKLSFLKQAFVVTLGMSAALSMAAPFKVVTTFTVIQDIAQNVAGDKAVVESITKPGAEIHDYQPTPKDIAKAQKADLILW
NGMNLERWFERFFENVKGKPAVVVTEGITPIAITEGEYKNLPNPHAWMSSANALQYIENIRAALVKYDPKNAESYNQNAK
AYAEKVKAIAEPLRQRLSVIPEAQRWLVTSEGAFSYLAQDYQLKELYLWAINAEEQGSPQQVKKVIDGVKANNIPVVFSE
STVSDKPAKQVAKETGALYGGVLYVDSLSTKDGAVPTYLDLLKVTISTIVDGFEKSKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-92 64
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 2e-92 64
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 2e-92 64
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 2e-92 64
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 1e-92 64

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ASU2_01380 YP_006816657.1 iron (chelated) ABC transporter, periplasmic-binding protein BAC0439 Protein 2e-97 71
ASU2_01380 YP_006816657.1 iron (chelated) ABC transporter, periplasmic-binding protein BAC0349 Protein 7e-93 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ASU2_01380 YP_006816657.1 iron (chelated) ABC transporter, periplasmic-binding protein VFG0525 Protein 7e-93 64