Gene Information

Name : ASU2_10110 (ASU2_10110)
Accession : YP_006818389.1
Strain : Actinobacillus suis H91-0380
Genome accession: NC_018690
Putative virulence/resistance : Virulence
Product : capsule polysaccharide export protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2219100 - 2220281 bp
Length : 1182 bp
Strand : +
Note : COG1596 Periplasmic protein involved in polysaccharide export

DNA sequence :
ATGAAACCCATCAAATTTAGATTACTCCTTTCTGGGCTGGTTGCCAGTTTAGCTGCCTGCTCAAGCTTACCCACTTCAGG
CCCTAGCCATAGTGCGATTTTAGAGGCTAATTCCCAGAATTCAGATAAACCTTTACCGGAAGTTAATTTAGTGGAGTTAG
ATAATGGCTTAGTTCAGCAGTTGTATCAGACTCAGCAAAGTCAGCAATTTTCCGGCTTTTTAGGCACGGCTGGCGGTGCT
GGATATGCCGGTGCGGTCAATGTAGGGGACGTGCTTGAAATTTCGATTTGGGAAGCGCCGCCGGCAGTGTTGTTTGGCGG
TACTTTCAGTTCTGAAGGGCAGGGTAGTGGGCATTTAACCCAATTACCGGCGCAAATGGTTAACCAAAACGGTACGGTTA
CTGTGCCGTTTGTCGGCAATATTCGTGTAGCGGGTAAAACACCGGAAGCGATTCAGTCTCAAATTGTCGGTGCGTTGCAG
CGTAAGGCAAATCAGCCGCAGGTATTAGTTAAAATAGCCAATAATAACTCTGCGGATGTGACGGTTATTCGTCAGGGCAA
CAGTATTCGTATGCCGTTAACTGCAAATAATGAGCGTGTGTTAGATGCGGTGGCAGCGGTAGGCGGGACAACGGAAAACA
TTGAAGATGTGACGGTTAAATTAACTCGTGGCTCTCAAGTAAAAACGTTGGCGTTTGAAACCTTAATTTCTGATCCGGCA
CAAAATATTATGTTACGTGCCGGCGATGTGGTTTCGCTGTTGAATACACCTTATAGCTTTACCGGTTTAGGTGCAGTGGG
TAATAACCAGCAAATGAAATTCTCCAGTAAGGGTATTACGCTTGCCGAGGCTATCGGTAAGATGGGCGGTTTAATTGATA
CCCGTTCGGATCCGAGAGGGGTATTTGTGTTTCGCCATGTGCCTTTTGCCCAGTTGAGTTTAGATCAACAAGCACAATGG
GAGGCAAAAGGTTATGGTATCGGCATGGATGTGCCGACGGTTTATCGTGTGAATTTACTCGAGCCGCAATCAATGTTTTT
ATTACAGCGTTTCCCAATGCAGGATAAAGATATTGTGTATGTTTCGAATGCACCATTGTCTGAGTTCCAAAAATTCTTAA
GAATGATTTTCTCAGTAACATCACCGATTACGAGTACTACTAACAGTATTCGTAGCTATTAA

Protein sequence :
MKPIKFRLLLSGLVASLAACSSLPTSGPSHSAILEANSQNSDKPLPEVNLVELDNGLVQQLYQTQQSQQFSGFLGTAGGA
GYAGAVNVGDVLEISIWEAPPAVLFGGTFSSEGQGSGHLTQLPAQMVNQNGTVTVPFVGNIRVAGKTPEAIQSQIVGALQ
RKANQPQVLVKIANNNSADVTVIRQGNSIRMPLTANNERVLDAVAAVGGTTENIEDVTVKLTRGSQVKTLAFETLISDPA
QNIMLRAGDVVSLLNTPYSFTGLGAVGNNQQMKFSSKGITLAEAIGKMGGLIDTRSDPRGVFVFRHVPFAQLSLDQQAQW
EAKGYGIGMDVPTVYRVNLLEPQSMFLLQRFPMQDKDIVYVSNAPLSEFQKFLRMIFSVTSPITSTTNSIRSY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrA NP_273135.1 capsule polysaccharide export outer membrane protein Not tested IHT-A Protein 2e-87 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ASU2_10110 YP_006818389.1 capsule polysaccharide export protein VFG0687 Protein 1e-128 80
ASU2_10110 YP_006818389.1 capsule polysaccharide export protein VFG0699 Protein 1e-128 80
ASU2_10110 YP_006818389.1 capsule polysaccharide export protein VFG0255 Protein 1e-87 59
ASU2_10110 YP_006818389.1 capsule polysaccharide export protein VFG2566 Protein 1e-65 44