Gene Information

Name : ASU2_09040 (ASU2_09040)
Accession : YP_006818177.1
Strain : Actinobacillus suis H91-0380
Genome accession: NC_018690
Putative virulence/resistance : Virulence
Product : capsule polysaccharide modification protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1996411 - 1997631 bp
Length : 1221 bp
Strand : +
Note : COG3562 Capsule polysaccharide export protein

DNA sequence : 
ATGATCAACCATTATTTAGATGATTTGATTGAGCAATCAAATCGGATTTTGCTATTGCAAGGTCCGATAGGCGCTTTCTT
CACCCAATTATCGGAATGGTTACAAACTCAAAATCGCAGTGTATTTAAAATTAACTTAAATGCCGGTGATGAATTTTTTT
ATCCGAATAGCATTGCTAATACCTTTGCTTATCGCGATACCTTAGAAAATTTTCATCAATATTTAACCGACTTTTGCCAA
ACGCATAACATTGATAGCGTGGTATGTTTTGGTGATAACCGTAAATATCACAAATTGGCTAAAACGGTTTGTCAGCATTT
AAATATCGCATTTTGGGCTTTTGAAGAAGGTTACTTCCGTCCGGATTACGTCACGTTTGAAAAAACCGGGGTAAACGCTT
ATTCACCCATTCCAAAGCAGGCAGATTATTTCCGAGCGTTCGAACACTTATCGGAGCCAAACAAAGCACAAAGTGTAGCC
AAAGGTTTCTGCCCGATGGCAAAACTGGCCATCCAATATTACGTGTCGGCATATTATCGCCGTCATCAATATCCGGAATA
TCGCCACCATCGTTTATTAAATGTGTGGTACTACGTAAAATTATGGATGGTTTCAGGGATTAAACGGCTGCACTATTATA
TGCACGATCGCAATTTTTCTAAGCGTGTTGAGCAAGGCGAATTCGGTGAGTTTTTTATTTTGCCGTTACAAGTTTATGAT
GATAGCCAAATTTTAGTGCATAGCGATTATCCTAGCGTAGCTGCAGTGTTACGGGAAGTGTTGTCATCTTTTGCCACCAA
AGCACCGAAACATTTAAATTTAATCGTAAAACATCATCCGATGGATCGTGGCTTTATTGATTACGGTAAAGTGATTGATG
AATATATGGAACAATATCCTGATCTGAAAAAGCGCATTTACTATATTCACGATGTGCCAATGCCGGTTTTCTTGCGCCAC
GGGAAAGGAATGGTTACGCTAAATAGTACCAGCGGTATTTCAGCGTTATTACACAATATGCCGGTCAAAACCTTAGGTCG
AGCCAATTATGATTTTGCCGGGCTAACCTATCAAGGCAATCTAGACGACTTTTGGAGCAATCCGGAAAAACCGGATGATG
GATTATTTCATGCTTATCGTAAATTCCATCTGTATAAAACGCATATTAACGGTAGCTTCTATAACAAGGTAATTCTGCGT
TATCCATACAACCAAAAGTAG

Protein sequence : 
MINHYLDDLIEQSNRILLLQGPIGAFFTQLSEWLQTQNRSVFKINLNAGDEFFYPNSIANTFAYRDTLENFHQYLTDFCQ
THNIDSVVCFGDNRKYHKLAKTVCQHLNIAFWAFEEGYFRPDYVTFEKTGVNAYSPIPKQADYFRAFEHLSEPNKAQSVA
KGFCPMAKLAIQYYVSAYYRRHQYPEYRHHRLLNVWYYVKLWMVSGIKRLHYYMHDRNFSKRVEQGEFGEFFILPLQVYD
DSQILVHSDYPSVAAVLREVLSSFATKAPKHLNLIVKHHPMDRGFIDYGKVIDEYMEQYPDLKKRIYYIHDVPMPVFLRH
GKGMVTLNSTSGISALLHNMPVKTLGRANYDFAGLTYQGNLDDFWSNPEKPDDGLFHAYRKFHLYKTHINGSFYNKVILR
YPYNQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lipB NP_273146.1 capsule polysaccharide modification protein Not tested IHT-A Protein 3e-108 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ASU2_09040 YP_006818177.1 capsule polysaccharide modification protein VFG0705 Protein 7e-132 64
ASU2_09040 YP_006818177.1 capsule polysaccharide modification protein VFG0693 Protein 7e-132 64
ASU2_09040 YP_006818177.1 capsule polysaccharide modification protein VFG0260 Protein 1e-108 52