Gene Information

Name : ASU2_06490 (ASU2_06490)
Accession : YP_006817675.1
Strain : Actinobacillus suis H91-0380
Genome accession: NC_018690
Putative virulence/resistance : Virulence
Product : iron transporter membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1428797 - 1429627 bp
Length : 831 bp
Strand : +
Note : COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components

DNA sequence : 
ATGAATGAGTTAGTGCTATGGTTCATTGAGCCTTTTGAATTTGAATTTATGCAAACCGCTTTGTTTACTGCGGTATTAGT
CGCTTCTGTTTGTGCGGTATTGTCTTGTTATTTGATTTTAAAAGGCTGGTCATTGATGGGCGATGCGATTTCTCATGCGG
TATTACCGGGGGTGGTCGTATCTAACTTATTAGGCTTCCCTTTAGCCATCGGAGCATTTGTCTCTGGGCTATTTTGTGCA
ATTTCCGTCGGTTATCTTAAAGAAAACTCTCGTTTAAAAGAAGATACCATTATGGGCATTATGTTTGCCGGCTTATTTGC
GCTCGGTATTGTACTTTTTACCGCACTACCGACCGAACAGCACCTTACCCACTTATTATTCGGCAATTTGCTTGGTGTGA
CTCAAGCCGAATTAATTCAAACCATGATTATTTGTGCGGTAACTTTTAGCATCATTATCTTTAAACGCAAAGACTTCTTG
CTCTATTGCTTCGATAGTAGCCACGCTAAAGTTATCGGTTTACCGGTCAAATGGTTACACTACGGACTACTTGCGCTCTT
AGCGTTAACTATCATCAGCGCAATGCAAGTTGTAGGTGTCATTCTGGTTGTTGCAATGTTAATTGCCCCGGGAATTACCG
CCTACCAACTGTCAAACCGCTTTGATTATATGTTAGTCATCGCAATGACTATTGCCATCAGTTCATCTGTTTTTGGTACG
ATATTGAGCTATCATATTGATGCAGCAACGGGCCCGACAATTATTCTCATTCAGTCTAGTCTTTTTGTTTTAGCTCTATG
TTTCAGCCGTTTAAAGACTCACAAGCGGTAA

Protein sequence : 
MNELVLWFIEPFEFEFMQTALFTAVLVASVCAVLSCYLILKGWSLMGDAISHAVLPGVVVSNLLGFPLAIGAFVSGLFCA
ISVGYLKENSRLKEDTIMGIMFAGLFALGIVLFTALPTEQHLTHLLFGNLLGVTQAELIQTMIICAVTFSIIIFKRKDFL
LYCFDSSHAKVIGLPVKWLHYGLLALLALTIISAMQVVGVILVVAMLIAPGITAYQLSNRFDYMLVIAMTIAISSSVFGT
ILSYHIDAATGPTIILIQSSLFVLALCFSRLKTHKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD NP_461785.1 permease Virulence SPI-1 Protein 5e-54 48
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 3e-54 48
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-53 47
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 1e-53 47
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 1e-53 47
ef0094 AAM75297.1 EF0094 Not tested Not named Protein 1e-34 42
EF0576 NP_814341.1 cation ABC transporter permease Not tested Not named Protein 2e-34 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ASU2_06490 YP_006817675.1 iron transporter membrane protein BAC0442 Protein 3e-71 61
ASU2_06490 YP_006817675.1 iron transporter membrane protein BAC0352 Protein 2e-54 48
ASU2_06490 YP_006817675.1 iron transporter membrane protein BAC0441 Protein 3e-39 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ASU2_06490 YP_006817675.1 iron transporter membrane protein VFG0528 Protein 2e-54 48