Gene Information

Name : ASU2_06485 (ASU2_06485)
Accession : YP_006817674.1
Strain : Actinobacillus suis H91-0380
Genome accession: NC_018690
Putative virulence/resistance : Virulence
Product : iron (chelated) transport system membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1427950 - 1428804 bp
Length : 855 bp
Strand : +
Note : COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components

DNA sequence : 
ATGTTAGAACTACTACTCGAACCATTCCAATATAACTACATGCAAAAAGCGATTTTTGTCAGTATGGGCGTTGGTGTGGT
TTGTGCTTTTCTCTCCGCCTTTTTAATGTTAAAAGGCTGGTCTTTAATTGGTGACGCCCTTTCACATGCCGTGGTACCGG
GCGTTGCTATCGCTTATGCGTTAAAACTTCCTTATGCTTTCGGTGCATTTTTTTCCGGTATTCTTGCTGCTCTTTCGATT
TTATGGGTGAAAAGTATTACTCGAATAAAAGAAGATGCGGTTATCGGCTTCATCTTTACCACATTCTTTGCACTAGGTAT
GTTTATTGTATCACTCAACCCGACTTCGGTTGACGTTAATGCCATCGTGATGGGGAACATTCTCGGTATTGCGGATGAAG
ATTTGTGGCAAGTTGCGATCATTATCGGATTATCGCTGCTTGGTCTTATCTGTTTCTGGAAAGATCTACTGCTCACCTTT
TTTGATGAACATCATGCGCTGTCTGTCGGACTTTCTCCTCTTCGCTACAAAATCTTATTCTTTACCTTATTAAGTGCTTG
TGTCGTGGTGGCATTGCAAACAGTCGGCGCAATCTTAGTGATTGCAATGGTCGTTACCCCAGGCGCAACCGCCTATTTAC
TGACAGACAGATTCTCTCGTTTAGTCACTATCGCGATTCTTATCGGTAGCCTCAGCAGCGGGATCGGTGCCTATCTCAGT
TATTTTTTAAATGGTGCGACCGGTGGTGTGATTGTTTGCTTACAGACCTTTATCTTTTTACTGGCTTTTTGCTTTGCGCC
TAAATACGGTTTGATTAGCCAAAAACGTAAGCGTTTGGAGGCTATCAATGAATGA

Protein sequence : 
MLELLLEPFQYNYMQKAIFVSMGVGVVCAFLSAFLMLKGWSLIGDALSHAVVPGVAIAYALKLPYAFGAFFSGILAALSI
LWVKSITRIKEDAVIGFIFTTFFALGMFIVSLNPTSVDVNAIVMGNILGIADEDLWQVAIIIGLSLLGLICFWKDLLLTF
FDEHHALSVGLSPLRYKILFFTLLSACVVVALQTVGAILVIAMVVTPGATAYLLTDRFSRLVTIAILIGSLSSGIGAYLS
YFLNGATGGVIVCLQTFIFLLAFCFAPKYGLISQKRKRLEAINE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 6e-62 61
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 5e-62 61
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 7e-62 61
sitC NP_461784.1 permease Virulence SPI-1 Protein 7e-62 61
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 6e-62 61

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ASU2_06485 YP_006817674.1 iron (chelated) transport system membrane protein BAC0441 Protein 8e-78 73
ASU2_06485 YP_006817674.1 iron (chelated) transport system membrane protein BAC0351 Protein 3e-62 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ASU2_06485 YP_006817674.1 iron (chelated) transport system membrane protein VFG0527 Protein 3e-62 61