Gene Information

Name : MC28_G291 (MC28_G291)
Accession : YP_006816263.1
Strain :
Genome accession: NC_018689
Putative virulence/resistance : Resistance
Product : Two-component response regulator vanRB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 324139 - 324825 bp
Length : 687 bp
Strand : -
Note : -

DNA sequence :
ATGACTACAAGAGGTGATATTATGAAGAACTATCACATTCTGGTGGTAGAAGATGATCAAGAAATACAAGAATTAATCAA
ACAATTTTTAATGACACAACAGTATAAAGTTATAGTTGCATCAGATGGATTAGAGGGCATGAAACAATTTAATAAGCAAT
CCTTCGATTTAATTCTTCTAGATGTGATGATGCCAAACCTAAATGGATTTGAAGTTGCCAAAATGATTCGAAGTCAGTCA
AATATACCAATTATTATGCTAACTGCGCTAGAAGAAGAACAAGATCAAATGAAAGGATTTGATCTTGGAATCGATGATTA
TATTACGAAACCTTTTTCTTTTCATGTTTTGATGAGACGAGTCGAAGCAGTACTGAGAAGAAGTAATAATCAAATTACGG
ATAATCATTTTGTATTTAGAGAACTACATGTCAATGGCGATGCATATAAAGTATATGTAAATAAAGTTGAAGTTCCCCTA
ACGACAAAAGAATTTGAAATTTTGCAACTACTACTTCAAAATGAAAAAAAGGTACTCACAAGAGAAAATATCGTAGAAAA
AATTTGGGGATATGAGTATGCCGGAGACACACGAATGATTGATACGCATATGAAAAACATACGAAAAAAATTAGATATAC
CCTATATTAAAACAGTAAAGGGCATTGGTTATAAAATCGATGAATAG

Protein sequence :
MTTRGDIMKNYHILVVEDDQEIQELIKQFLMTQQYKVIVASDGLEGMKQFNKQSFDLILLDVMMPNLNGFEVAKMIRSQS
NIPIIMLTALEEEQDQMKGFDLGIDDYITKPFSFHVLMRRVEAVLRRSNNQITDNHFVFRELHVNGDAYKVYVNKVEVPL
TTKEFEILQLLLQNEKKVLTRENIVEKIWGYEYAGDTRMIDTHMKNIRKKLDIPYIKTVKGIGYKIDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_001698483.1 regulatory protein Not tested Not named Protein 5e-67 67
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 2e-46 42
vanRB NP_815956.1 DNA-binding response regulator VanRB Not tested Not named Protein 1e-47 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MC28_G291 YP_006816263.1 Two-component response regulator vanRB HE999704.1.gene1202. Protein 8e-51 47
MC28_G291 YP_006816263.1 Two-component response regulator vanRB AF310956.2.orf0.gene Protein 9e-47 42
MC28_G291 YP_006816263.1 Two-component response regulator vanRB U35369.1.gene1.p01 Protein 5e-48 42
MC28_G291 YP_006816263.1 Two-component response regulator vanRB AE016830.1.gene2255. Protein 5e-48 42
MC28_G291 YP_006816263.1 Two-component response regulator vanRB NC_012469.1.7685629. Protein 2e-35 41
MC28_G291 YP_006816263.1 Two-component response regulator vanRB NC_002952.2859905.p0 Protein 1e-38 41
MC28_G291 YP_006816263.1 Two-component response regulator vanRB NC_009641.5332272.p0 Protein 2e-38 41
MC28_G291 YP_006816263.1 Two-component response regulator vanRB NC_013450.8614421.p0 Protein 2e-38 41
MC28_G291 YP_006816263.1 Two-component response regulator vanRB NC_007793.3914279.p0 Protein 2e-38 41
MC28_G291 YP_006816263.1 Two-component response regulator vanRB NC_007622.3794472.p0 Protein 1e-38 41
MC28_G291 YP_006816263.1 Two-component response regulator vanRB NC_002745.1124361.p0 Protein 2e-38 41
MC28_G291 YP_006816263.1 Two-component response regulator vanRB NC_009782.5559369.p0 Protein 2e-38 41
MC28_G291 YP_006816263.1 Two-component response regulator vanRB NC_002951.3237708.p0 Protein 2e-38 41
MC28_G291 YP_006816263.1 Two-component response regulator vanRB NC_003923.1003749.p0 Protein 1e-38 41
MC28_G291 YP_006816263.1 Two-component response regulator vanRB NC_002758.1121668.p0 Protein 2e-38 41