Gene Information

Name : MC28_G198 (MC28_G198)
Accession : YP_006816170.1
Strain :
Genome accession: NC_018689
Putative virulence/resistance : Virulence
Product : Alveolysin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 229151 - 230722 bp
Length : 1572 bp
Strand : -
Note : -

DNA sequence : 
ATGAATTTACATAAATACGAAAAAAGGAAGAAGTTGATTTTTGTGAAGACTACAAGAAATACAAAAGGAAAAAAATTACT
AGCAAGTTTAATAATCAGTTTTTGCACTATTAATTATTCATCTATTTCATTAGCGGAAACACCTAAAAGTAATTCAGCTA
ATGCACCCAAACAAGCTATTGGCATTGATACTGGTATAGCAAATTTAAAGTATGATAGTAGAGATATTTTAGCAGTAAAT
GGGGATAAAGTAGAGAGTTTTGTTCCGAAAGAAAGTACAAATTCAAATGGTAAATTTGTAGTAGTGGAACGTGAGAAAAA
ATCACTTACAACGTCACCAGTCGATATTTCGATTATTGATTCTGTAGCTAATCGTACGTATCCAGGAGCAGTACAACTTG
CAAATAAAGCTTTTGCAGATAATCAACCTAGTTTATTAGTGGCTAAGAGAAAACCTATAAATATTAGTATAGACTTACCT
GGAATGAGAAAAGAAAATACGATATCTGTCCAAAATCCGACATATGGTAATGTGTCTGGAGCAGTAGATGATTTAGTATC
TACTTGGAATGAGAAGTATGCATCAACACATTCGTTACCTGCAAGAATGCAGTATACAGAATCTATGGTGTATAGTAAAT
CACAAATTGCAAGTGCTCTTAATGTCAACGCTAAATATCTTGATAACAGTCTAAACATTGACTTTAATGCCGTTGCAAAT
GGAGAGAAAAAAGTGATGGTTGCGGCATATAAGCAAATATTTTATACCGTAAGTGCTGAACTACCTAACAATCCATCTGA
TCTTTTTGATGACAGTGTTACGTTTGATGAGTTAACTCGTAAAGGGGTAAGTAATACGGCTCCGCCTGTTATGGTGTCAA
ATGTAGCCTATGGTAGAACCGTTTATGTAAAATTAGAAACATCATCTAAAAGTAAAGATGTACAAGCTGCTTTTAAAGCT
CTAATTAAGGGTCAAGGCGTTGAAGCGAGTGGACAGTACAAAGATATTTTTGAAGAAAGTACCTTTACGGCTGTCGTATT
AGGCGGAGATGCAAAAGAGCATAACAAAGTTGTTACAAAAGATTTTAATGAAATCCGAAATATTATTAAAGATAATGCAG
AATTAAGTTCTAAAAATCCAGCATACCCAATTTCATATACAAGCACTTTCTTAAAAGATAACGCAACTGCTGCTGTTCAT
AACAATACAGTTTATGTTGAGACTACAACTACAGAATATTCAAGTGCGAAAATGACGCTTGATCATTACGGTGCATATGT
TGCTCAATTTGATGTATCTTGGGATGAATTTTCATATGATGCAAATGGGAAAGAAATATTAACACATAAAACTTGGGAAG
GGAACAACCAAGATAAAACGGCTCATTACTCTACAGTAATACCACTTCCACCGAATTCAAAAAATGTAAAAATCCTAGCG
AGAGAATGTACGGGTCTTGCATGGGAATGGTGGAGAACCATTATTAATGAACAGAATGTTCCATTAACAAATGAAATAAA
AGTTTCAATTGGAGGAACAACTTTATACCCAACTGCTAATATTAGTCATTAG

Protein sequence : 
MNLHKYEKRKKLIFVKTTRNTKGKKLLASLIISFCTINYSSISLAETPKSNSANAPKQAIGIDTGIANLKYDSRDILAVN
GDKVESFVPKESTNSNGKFVVVEREKKSLTTSPVDISIIDSVANRTYPGAVQLANKAFADNQPSLLVAKRKPINISIDLP
GMRKENTISVQNPTYGNVSGAVDDLVSTWNEKYASTHSLPARMQYTESMVYSKSQIASALNVNAKYLDNSLNIDFNAVAN
GEKKVMVAAYKQIFYTVSAELPNNPSDLFDDSVTFDELTRKGVSNTAPPVMVSNVAYGRTVYVKLETSSKSKDVQAAFKA
LIKGQGVEASGQYKDIFEESTFTAVVLGGDAKEHNKVVTKDFNEIRNIIKDNAELSSKNPAYPISYTSTFLKDNATAAVH
NNTVYVETTTTEYSSAKMTLDHYGAYVAQFDVSWDEFSYDANGKEILTHKTWEGNNQDKTAHYSTVIPLPPNSKNVKILA
RECTGLAWEWWRTIINEQNVPLTNEIKVSIGGTTLYPTANISH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
slo YP_281505.1 streptolysin O Virulence Not named Protein 1e-143 62
hly AAA69525.1 listeriolysin O Virulence LIPI-1 Protein 1e-95 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MC28_G198 YP_006816170.1 Alveolysin VFG2275 Protein 4e-167 70
MC28_G198 YP_006816170.1 Alveolysin VFG0976 Protein 3e-144 63
MC28_G198 YP_006816170.1 Alveolysin VFG1363 Protein 7e-98 44
MC28_G198 YP_006816170.1 Alveolysin VFG0074 Protein 1e-95 43