Gene Information

Name : MC28_F143 (MC28_F143)
Accession : YP_006815826.1
Strain :
Genome accession: NC_018688
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 168162 - 168875 bp
Length : 714 bp
Strand : +
Note : -

DNA sequence : 
ATGGAGGTTGTTAGATTAGAAAATGTAGTAAAAACATATGGAGAGGGAGAAACGCAAGTACAGGCGTTAAAAGGAATTAA
TCTTTCCATTCATAGGGGAGAATTCGTAACCATAGTTGGAGCGTCAGGTTCTGGTAAAAGTACGTTATTGCATATTTTAG
GAGGGCTCGATCGCCCGAGTTCAGGAAATGTGTTTATAGGTGGTGAAAATATTTACAATTATAAAGATAATGAACTTTCT
ATTTTTCGCCGAAGAAAAGTTGGCTTTATATTTCAGTTTTTTAATTTGATTCCTGTCTTGAATGTACAAGAAAATATTGC
TTTGCCAGCTCTATTGGACGAGGAACAGGTAGATGATCATTACCTGGATGAAATTATACGAACTCTAGGGTTAAATGAAA
GACGAGATCATTTGCCTTCTGAATTATCGGGTGGTCAACAACAAAGGGTATCTATTGGTAGATCTCTTATAAATAAACCC
GATATCATCTTAGCGGATGAACCAACCGGAAATCTAGATACAACAAATACAAAAGAAGTTCTGAATTTATTAAAAGTAAC
GGCTAAAAAATATAATCAGACGGTGATTTTAATTACCCATGACCCTGCTATCGCATCAAACTCTGATCGAATTATAACCA
TTGCAGATGGCATGATTATTTCAGATAAACAATTAGTGCAAAATCAAGCAAAATGTGGAGGGGAGGAGTATTGA

Protein sequence : 
MEVVRLENVVKTYGEGETQVQALKGINLSIHRGEFVTIVGASGSGKSTLLHILGGLDRPSSGNVFIGGENIYNYKDNELS
IFRRRKVGFIFQFFNLIPVLNVQENIALPALLDEEQVDDHYLDEIIRTLGLNERRDHLPSELSGGQQQRVSIGRSLINKP
DIILADEPTGNLDTTNTKEVLNLLKVTAKKYNQTVILITHDPAIASNSDRIITIADGMIISDKQLVQNQAKCGGEEY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-40 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-41 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-41 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-41 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MC28_F143 YP_006815826.1 ABC transporter CP001581.1.gene798.p Protein 7e-67 59
MC28_F143 YP_006815826.1 ABC transporter CP001581.1.gene598.p Protein 9e-59 52
MC28_F143 YP_006815826.1 ABC transporter NC_012469.1.7686878. Protein 2e-44 44
MC28_F143 YP_006815826.1 ABC transporter NC_008702.1.4606598. Protein 4e-37 42