Gene Information

Name : sph (MC28_E156)
Accession : YP_006815654.1
Strain :
Genome accession: NC_018687
Putative virulence/resistance : Virulence
Product : Sphingomyelinase C
Function : -
COG functional category : -
COG ID : -
EC number : 3.1.4.12
Position : 157373 - 158374 bp
Length : 1002 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAAGTAAGCTTTTAAAAGGTGTACTTAGTTTTGGAATTGGTCTTGGAGTTTTATATGGTGGATCTACCGCTCAAGC
GGCAACGTCCACAAATCAAAACGATACATTAAAAGTGATGACTCATAATGTATATATGTTATCAACGAATTTATATCCAA
ACTGGGGACAAAGTCAGCGTGCTGATTTAATTGGTGCAGCTAATTATATAAAGGGTCAGGATGTTGTTATATTAAATGAA
GTATTTGATAATAGTGCATCAGATCGTTTGTTAGGGAATTTAAAGAAAGAATATCAATATCAAACGGCTGTACTAGGCCG
TAGTAACGGAAGCGAATGGGATAAAACGTTAGGAAGCTATTCATCTTCTAATCCTGAAGATGGAGGAGTGGCTATCGTGA
GTAAGTGGCCAATCGTTGAAAAAATTCAATATGTGTTTGAAAAAGGATGTGGGCCAGATAATTTATCAAATAAAGGATTT
GCATATACTAAAATTAAGAAAAATGATCGTTTTGTTCATGTAATTGGGACGCATTTACAAGCTGAAGATGATGGGTGTGG
ACAAACTACACCAGCATCTGTACGTGCAGCACAGCTAAAAGAAATTCAAGAATTTATTAAAAATAAAAATATTCCCTCTA
ACGAGTATGTGCTAATTGGTGGTGATATGAATGTAAATAAAATAAATGCTGTGAATAATATCAATTCAGAGTATAGATCA
ATGCTTGATACATTACATGCTTCGTCACCAGCGTATACAGGACATACAGCAACTTGGGATGCGACAACAAATAGTATTGC
AAACTATAATTTCCCAAATGCTCCAGCAGAATATTTAGATTACATTGTTTCTAGTAAAGATCATGCAAATCCCGTATATA
TAGAAAATAAAGTGTTGCAACCAAACTCTCCAGAATGGTCCGTTACATCATGGTACCAAACATATACGTATAATGATTAC
TCTGACCATTATCCGGTAGAGGCGACTCTTTTTATGAAATAG

Protein sequence : 
MKSKLLKGVLSFGIGLGVLYGGSTAQAATSTNQNDTLKVMTHNVYMLSTNLYPNWGQSQRADLIGAANYIKGQDVVILNE
VFDNSASDRLLGNLKKEYQYQTAVLGRSNGSEWDKTLGSYSSSNPEDGGVAIVSKWPIVEKIQYVFEKGCGPDNLSNKGF
AYTKIKKNDRFVHVIGTHLQAEDDGCGQTTPASVRAAQLKEIQEFIKNKNIPSNEYVLIGGDMNVNKINAVNNINSEYRS
MLDTLHASSPAYTGHTATWDATTNSIANYNFPNAPAEYLDYIVSSKDHANPVYIENKVLQPNSPEWSVTSWYQTYTYNDY
SDHYPVEATLFMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlb NP_646757.1 truncated beta-hemplysin Not tested ¥ÕSa3 Protein 5e-68 57
hlb NP_375112.1 hypothetical protein Not tested ¥ÕSa3 Protein 6e-68 57
truncated-hlb NP_372527.1 hypothetical protein Not tested ¥ÕSa3 Protein 4e-68 57
unnamed CAA70683.2 sphingomyelinase-c Virulence LIPI-2 Protein 1e-71 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sph YP_006815654.1 Sphingomyelinase C VFG1798 Protein 2e-75 56
sph YP_006815654.1 Sphingomyelinase C VFG0674 Protein 7e-72 55