|
Name : MC28_D126 (MC28_D126) Accession : YP_006815414.1 Strain : Genome accession: NC_018686 Putative virulence/resistance : Unknown Product : group II intron reverse transcriptase/maturase Function : - COG functional category : - COG ID : - EC number : - Position : 104519 - 106360 bp Length : 1842 bp Strand : + Note : - DNA sequence : ATGAATGTGGGCAAAACACCAAGGAGGTGTCCACAGTTGAACGCAAGAATGAGATATTGGGAGTATTACAATATGCAAGA AACGTTTGATAAGCTATATGAAGATAGTCGAGCTAATAAACCATTTCAGGGATTGTATGAAATGATTACGGCAGAAAATA ATATTTTACTAGCTTATCGAACGATTAAATCCAATAAAGGGTCTAAAACAGCTGGGATAGATTCTTTTGCAATCGATCAA TACAAATCAATGGATAAGGCTGAATTCTTAAACTTGGTTCGTAATCGATTAAATCAATATAAACCTAAAGCTGTAAAAAG AGTATTCATTCCTAAGCCTAATGGTGACAAAAGACCTTTAGGGATTCCAACCATGTTTGATCGACTTATTCAGCAAATGA TTAAGCAAATATTAGAACCAATTTGTGAAGCAAAATTCTATGAGCATAGTTATGGATTTCGACCTTTAAGAGGTGCAAGG CATGCTATCTCAAGAGTTATGTATCTCATTAGTCGAAATACTTTTCATTATGCTGTAGAAATTGACATCAAAGGATTCTT TGACAATGTTAATCATACGTTACTATTGAAACAACTATGGAACATGGGAATCAAAGATAAAAGAGTGCTAAAGTTGATTT ATTTAATCCTTAAAGCACCTATAAAGGGAGTAGGAATCCCACGAAAAGGTACACCACAAGGAGGAATACTTTCACCACTA CTATCAAATGTGGTTTTGAACGATTTAGACCAATGGATAGCACGACAATGGCATCATTTTCAATCAGATTATGATTATAC CGAACCAGGTAATCGCAGTCGTGCTTTGAAAAGAACAAAATTAAAACAGGGTTACATTGTACGTTATGCGGATGATTTCA AAATCATGGCCAAAGATTTTCGTACTGCACAGAAGTGGTTTATGGCCACAAAATTATATTTAAAAGAACGATTAAAACTT GATATTTCACCAGGAAAATCAAGAATAATCAATCTAAGGAAAAATAAATCTGAATTTCTAGGTTACTCATTATATGTAGT ACCTAAAAGAAATAAGTGGGTGTGCAACTCAAACATTTCAGAGAAAAAGAAGAAACAAATTGAATCTGAATTGAGGAAGC GAATCAAATCTATTCAACGGTCAACAACACGGCAAAACGTACAATTATATAATGCCTATGTTTTAGGATTACGTAACTAC TTTAGGTACGCCACGCATGTAAATATTGATATGCATGAGCTTACATTCAGTGTATCTTTAACATTTTTCAATCGATTAAA AAGTGTTGGTAAATACGAAGTTCCAATTAATGCACCTCCGGTGTATAAGAAATTCTTTAAAAATAACTATCGAACATTTA AAGTTTGTGGGATTTATTTGTTTCCATTAGCAGATATTCAAACCGCAACCATTTGGAACTATACACAAAGTCAAACTCCA TACTCTAAGAAGGGTAGAAATAGTGCCGAGCACAAGGAACTCGATAGAAATGTACTAGTTGAGATAACAAGACTACTTAC AGTAAATACAATCAGTAGAAGTCTTGAGTATTCTGATAATCGTATATCTAGGTATTCTATGGTTATGGGAAAATGTGAGA TACTAAAAGAATTTTTAACTGCCAGTGAAGTGCATTGTCATCACTATGTTCCATTGGGACTAGGAGGAACAGACGATTAT TCTAATTTGCGAATTATCCGAAAGGATATTCATAGACTAATTCATGCCACCGATAATCGAACGATTGAGAATTACTTAAA GAGCTTACTTTTGACTGACGAACAAGTCAAAAGAATAAACCAATATCGAAGAGCTTGTAATTTAGAAGAAATCAAATATT AA Protein sequence : MNVGKTPRRCPQLNARMRYWEYYNMQETFDKLYEDSRANKPFQGLYEMITAENNILLAYRTIKSNKGSKTAGIDSFAIDQ YKSMDKAEFLNLVRNRLNQYKPKAVKRVFIPKPNGDKRPLGIPTMFDRLIQQMIKQILEPICEAKFYEHSYGFRPLRGAR HAISRVMYLISRNTFHYAVEIDIKGFFDNVNHTLLLKQLWNMGIKDKRVLKLIYLILKAPIKGVGIPRKGTPQGGILSPL LSNVVLNDLDQWIARQWHHFQSDYDYTEPGNRSRALKRTKLKQGYIVRYADDFKIMAKDFRTAQKWFMATKLYLKERLKL DISPGKSRIINLRKNKSEFLGYSLYVVPKRNKWVCNSNISEKKKKQIESELRKRIKSIQRSTTRQNVQLYNAYVLGLRNY FRYATHVNIDMHELTFSVSLTFFNRLKSVGKYEVPINAPPVYKKFFKNNYRTFKVCGIYLFPLADIQTATIWNYTQSQTP YSKKGRNSAEHKELDRNVLVEITRLLTVNTISRSLEYSDNRISRYSMVMGKCEILKEFLTASEVHCHHYVPLGLGGTDDY SNLRIIRKDIHRLIHATDNRTIENYLKSLLLTDEQVKRINQYRRACNLEEIKY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF2326 | NP_815981.1 | group II intron reverse transcriptase maturase | Not tested | Not named | Protein | 6e-102 | 41 |
