Gene Information

Name : kdpB (BN406_03536)
Accession : YP_006813625.1
Strain :
Genome accession: NC_018683
Putative virulence/resistance : Unknown
Product : Potassium-transporting ATPase subunit B
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.12
Position : 37489 - 39531 bp
Length : 2043 bp
Strand : +
Note : -

DNA sequence :
ATGTCAAACAAACCCAAGACCCCGAACCTCTTCGACCCGAAGATACTCTTCCCGGCAGCGAGAGCCGCTTTCGTCAAGCT
TGATCCGCGCCAGCTCGTGCGCAATCCGGTGATCTTCGTCACCGAAGCAGTGGCGGCGTTGGTGACCCTCTTCTTCGTTC
TCGATGTGGCAACCGACGGCGACAGCCTGCTCTTCTCGGGCCAGATCGCCGCCTGGCTATGGTTTACCGTTCTCTTCGCC
ACCTTCGCCGAAGCCGTTGCCGAGGGGCGCGGCAAGGCGCAGGCCGACTTCCTCCGCCGTACCAAATCGGAGCTCAGCGC
CCGCAAGCTTGTCGCCCCCGAGGGTCGGGAGACCAAGGAAACCCCCGCCACCATGCTGAAGGTCGGGGATCTCGTCCTCT
TAGAGGCCGGCGAATTGATCCCGGGCGACGGCGAGGTCGTCGAAGGGATCGCCTCGGTCAACGAGAGCGCGATAACGGGC
GAATCGGCCCCGGTGATCCGCGAGGCGGGCGGCGATCGCTCCGCCGTCACCGGCGGTACCGAGGTGCTTTCGGATTGGAT
CAAAGTCCGCATCACGACCGCCCCGGGTTCGACCTTCGTCGATCGCATGATCGCGCTCATCGAGGGGGCGCAGCGGCAGA
AGACGCCGAACGAGATCGCGCTGTCGATCCTGCTTTCCGGATTGACGCTGATCTTCCTGATTGCCGTGGTGACGCTCTGG
GGGCTTGCCGCCTATTCGGCGACCGTGCTTTCGGTGACCGTGCTTTCCGCCCTGCTTGTCACGCTGATCCCGACGACCAT
CGGCGGATTGCTTTCGGCGATCGGCATCGCCGGCATGGACCGGCTGGTTCGCTTCAACGTGATCGCCACCTCCGGCCGCG
CCGTCGAGGCTGCGGGGGACGTCGACACGCTGCTCCTCGACAAGACCGGGACGATCACCTTCGGCAACCGCATGGCAAGC
GATTTCCTGCCCGTGCCGGGCGTAACCGTGGAGGAGCTCGCCGATGCGGCGCTCCTCGCAAGCCTTGCCGACGAGACGCC
GGAGGGCCGCTCCATCGTGGCGCTCGCCACCGGCGAGTTCGGGCGCCGGGCGTCCGAGGCCGGGATAGATGCGATCGTGC
CCTTTGCCGCTGAAACCCGGTTGTCCGGCGTCGATCACGGCGGCCGTCGGCTGCGCAAGGGCGCGGTCGACTCGGTTCTG
AGTTTTGCCGGCCTGTCCGACAGCAATACCCCCCAGGAATTCCGGCAGGCGGTCGACCGGGTCGCCCGAACCGGCGGCAC
GCCGCTCGCCGTCGCCGACGGCAACCGGCTGCTCGGCGTGATCCACCTGAAGGACATCGTGAAACCCGGAATCAAGGAGC
GCTTCTCCGAATTGCGCGCTATGGGGATCCGCACGGTAATGGTGACCGGTGACAACCCGATCACTGCCGCGGCAATCGCC
TCGGAGGCCGGCGTCGACGATTTCCTCGCCGAAGCGACGCCGGAAGACAAGCTCGCCTATATCCGCAAGGAACAGAAGGG
CGGCCGGCTGATCGCCATGTGCGGCGACGGCACCAACGATGCGCCGGCGCTCGCCCAGGCGGATGTGGGCGTCGCCATGC
AGACCGGCACCCAAGCGGCCCGCGAAGCGGCCAACATGGTGGACCTCGATTCGAGCCCGACCAAGCTGATCGAGATCGTC
GAGATCGGCAAGCAATTGCTGATGACGCGCGGGTCTCTCACGACCTTCTCGATCGCCAACGACGTGGCGAAATACTTCGC
CATCATCCCGGCGCTCTTCGTCACCACCTATCCGGCGCTCGGCGTGCTCAACGTAATGGGGCTGGCGTCACCGCAGTCGG
CTATCCTGTCGGCCGTCATCTTCAACGCGCTGATCATCGTGGCGCTCATTCCGCTGGCATTGAAGGGCGTCAGGTACCGT
CCCGTCGGCGCGGCAGCCCTGCTTCGCGGCAATCTCCTCGTCTACGGCCTCGGCGGCCTGGTCCTGCCCTTCGCAGGGAT
CAAGCTGATCGACCTTGCCGTCTCGAACCTCAACCTGGTGTGA

Protein sequence :
MSNKPKTPNLFDPKILFPAARAAFVKLDPRQLVRNPVIFVTEAVAALVTLFFVLDVATDGDSLLFSGQIAAWLWFTVLFA
TFAEAVAEGRGKAQADFLRRTKSELSARKLVAPEGRETKETPATMLKVGDLVLLEAGELIPGDGEVVEGIASVNESAITG
ESAPVIREAGGDRSAVTGGTEVLSDWIKVRITTAPGSTFVDRMIALIEGAQRQKTPNEIALSILLSGLTLIFLIAVVTLW
GLAAYSATVLSVTVLSALLVTLIPTTIGGLLSAIGIAGMDRLVRFNVIATSGRAVEAAGDVDTLLLDKTGTITFGNRMAS
DFLPVPGVTVEELADAALLASLADETPEGRSIVALATGEFGRRASEAGIDAIVPFAAETRLSGVDHGGRRLRKGAVDSVL
SFAGLSDSNTPQEFRQAVDRVARTGGTPLAVADGNRLLGVIHLKDIVKPGIKERFSELRAMGIRTVMVTGDNPITAAAIA
SEAGVDDFLAEATPEDKLAYIRKEQKGGRLIAMCGDGTNDAPALAQADVGVAMQTGTQAAREAANMVDLDSSPTKLIEIV
EIGKQLLMTRGSLTTFSIANDVAKYFAIIPALFVTTYPALGVLNVMGLASPQSAILSAVIFNALIIVALIPLALKGVRYR
PVGAAALLRGNLLVYGLGGLVLPFAGIKLIDLAVSNLNLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 3e-142 60
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 2e-142 60
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-129 54
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-129 54
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-129 54
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 2e-130 54
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 3e-129 54
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-129 54