Gene Information

Name : O3I_040925 (O3I_040925)
Accession : YP_006813104.1
Strain : Nocardia brasiliensis HUJEG-1
Genome accession: NC_018681
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 9165780 - 9166016 bp
Length : 237 bp
Strand : -
Note : COG1476 Predicted transcriptional regulators

DNA sequence :
GTGCCTACTGAGGTCATCTACAACCGCATCGCGATGCTGCGCGCCGAGCGTGGCATCTCGCGGCGTGAGTTGGCGGAGGC
GCTCGGCGTGCACTACCAGACGATCGGCTACCTGGAACGCGGCGAGTACAGCCCCAGCCTGCATCTCGCCCTGCGGATCG
CGGCCTACTTCGAGGTGTCGGTGGAAATCGTCTTCTCCACCAACCCCTTTCCTCGCCTGGGCACCGAAACGGCTTGA

Protein sequence :
MPTEVIYNRIAMLRAERGISRRELAEALGVHYQTIGYLERGEYSPSLHLALRIAAYFEVSVEIVFSTNPFPRLGTETA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0086 NP_938485.1 regulatory protein Not tested Not named Protein 1e-13 55
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 1e-07 42
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 1e-07 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3I_040925 YP_006813104.1 XRE family transcriptional regulator VFG2168 Protein 4e-08 42
O3I_040925 YP_006813104.1 XRE family transcriptional regulator VFG2175 Protein 4e-08 42